Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC084357.1-201ENST00000473404 255 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC078785.3-201ENST00000476607 425 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 UBE2CP3-201ENST00000502715 450 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC021678.1-201ENST00000505195 936 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 CBX3P3-201ENST00000508108 532 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC079140.3-201ENST00000511111 550 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC024589.1-201ENST00000512207 263 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 RN7SKP234-201ENST00000517173 224 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 MTND4LP18-201ENST00000526864 291 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 RMST_8.1-201ENST00000610287 165 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC084035.1-201ENST00000634543 607 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 MIR4496-201ENST00000635896 61 ntBASIC3.72□□□□□ -1.81
PCDH9Q9HC56 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PCDH9Q9HC56 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.71□□□□□ -1.81
PCDH9Q9HC56 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.81
PCDH9Q9HC56 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC007656.2-201ENST00000624902 4547 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 Y_RNA.97-201ENST00000363094 102 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 RNU6-343P-201ENST00000364709 104 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 RNU6-809P-201ENST00000384461 107 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 DEFB108C-201ENST00000400154 252 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 MTATP6P27-201ENST00000416987 621 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC012065.2-201ENST00000421295 375 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC007389.2-201ENST00000434630 306 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 CDC27P1-201ENST00000445384 715 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AL359073.1-201ENST00000448036 403 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AL672167.3-201ENST00000465951 960 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 RPL7P47-201ENST00000497299 556 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 HMGN1P11-201ENST00000508668 303 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 MTCO3P44-201ENST00000510977 541 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 HIGD1AP3-201ENST00000515857 278 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 IGKV2-23-201ENST00000518729 323 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 COX6CP8-201ENST00000522620 226 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC068587.4-201ENST00000533893 186 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 OR6C73P-201ENST00000546432 358 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AP000403.1-201ENST00000603349 851 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC006077.1-201ENST00000604746 343 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AL592295.2-201ENST00000612578 206 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC004009.2-201ENST00000623016 728 ntBASIC3.71□□□□□ -1.82
PCDH9Q9HC56 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDH9Q9HC56 AC068647.1-201ENST00000489539 2265 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC058791.1-201ENST00000608412 3198 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 FGF7P2-201ENST00000332473 296 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 RNU6-28P-201ENST00000362378 107 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 RNU5E-5P-201ENST00000365379 116 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 SNORD3H-201ENST00000384486 214 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 RNU6-878P-201ENST00000384578 110 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 MT-TC-201ENST00000387405 66 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 RNU6ATAC-201ENST00000408749 126 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AL663109.1-201ENST00000411498 844 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 MTCO2P5-201ENST00000422621 426 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AL445669.1-201ENST00000426743 755 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AL590233.1-201ENST00000430017 456 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AL158071.1-201ENST00000430315 461 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms