Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 POU5F1P7-201ENST00000508759 541 ntBASIC3.02□□□□□ -1.93
NXF3Q9H4D5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 DEFB130C-202ENST00000530001 230 ntBASIC3.02□□□□□ -1.93
NXF3Q9H4D5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 AC010733.2-201ENST00000589496 5702 ntBASIC3.02□□□□□ -1.93
NXF3Q9H4D5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NXF3Q9H4D5 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC093831.2-201ENST00000624393 3427 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 RNU1-101P-201ENST00000391171 127 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AL121978.1-201ENST00000402778 359 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 MTCO2P8-201ENST00000412213 658 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC063976.3-201ENST00000426849 329 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC114973.1-201ENST00000429057 632 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 GTF2IP3-201ENST00000433887 494 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AL645638.1-201ENST00000440519 361 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 RPL17P49-201ENST00000443728 411 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 GAPDHP39-201ENST00000481866 979 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC117522.3-201ENST00000507974 584 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 SNORD59.2-201ENST00000516873 68 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 MTCO3P15-201ENST00000526563 574 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC087276.1-201ENST00000529659 480 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 LRRC6P1-201ENST00000532188 885 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 MIR4509-3-201ENST00000578671 94 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 MIR4509-2-201ENST00000583920 94 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AL669831.4-202ENST00000590817 238 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AP001542.2-201ENST00000593141 364 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AL020997.3-201ENST00000602843 359 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AC103881.1-201ENST00000603476 538 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AP000238.1-201ENST00000608759 426 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 MIR4509-1-201ENST00000618224 94 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 AL355493.4-201ENST00000618530 292 ntBASIC3.01□□□□□ -1.93
NXF3Q9H4D5 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.01□□□□□ -1.93
NXF3Q9H4D5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3□□□□□ -1.93
NXF3Q9H4D5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3□□□□□ -1.93
NXF3Q9H4D5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3□□□□□ -1.93
NXF3Q9H4D5 AL136360.1-201ENST00000503377 1900 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNU6-50P-201ENST00000362356 103 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNU6-374P-201ENST00000364146 108 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNU4-51P-201ENST00000364206 140 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 SNORA72.3-201ENST00000365074 132 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3□□□□□ -1.93
NXF3Q9H4D5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3□□□□□ -1.93
NXF3Q9H4D5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NXF3Q9H4D5 RNU6-339P-201ENST00000384310 107 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNA5SP56-201ENST00000410277 118 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNU6-584P-201ENST00000410350 95 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNA5SP21-201ENST00000410917 96 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3□□□□□ -1.93
NXF3Q9H4D5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3□□□□□ -1.93
NXF3Q9H4D5 NDUFB4P5-201ENST00000415445 361 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 AC019097.1-201ENST00000424783 735 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 NPM1P13-201ENST00000452663 865 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RPS24P6-201ENST00000452670 400 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 AC003982.1-202ENST00000469928 248 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RN7SL283P-201ENST00000489055 303 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3□□□□□ -1.93
NXF3Q9H4D5 OR5H5P-201ENST00000503164 928 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 HMGB1P22-201ENST00000505315 124 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNU6-415P-201ENST00000516252 97 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 RNA5SP468-201ENST00000516782 93 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 AC027309.2-201ENST00000520566 192 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 HPRT1P3-201ENST00000539521 576 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3□□□□□ -1.93
NXF3Q9H4D5 AC007954.1-201ENST00000554198 494 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3□□□□□ -1.93
NXF3Q9H4D5 VIS1.1-201ENST00000610517 203 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 AC123767.1-202ENST00000620407 817 ntBASIC3□□□□□ -1.93
NXF3Q9H4D5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3□□□□□ -1.93
NXF3Q9H4D5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NXF3Q9H4D5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NXF3Q9H4D5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NXF3Q9H4D5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
NXF3Q9H4D5 AC106754.1-201ENST00000562632 1513 ntBASIC2.99□□□□□ -1.93
NXF3Q9H4D5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
NXF3Q9H4D5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
NXF3Q9H4D5 MIR649-201ENST00000384843 97 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms