Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HMGN2P31-201ENST00000432430 273 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL121871.1-201ENST00000443413 436 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 RPL17P49-201ENST00000443728 411 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 RAC1P7-201ENST00000445367 377 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 MTCO1P27-201ENST00000448269 226 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC010655.1-201ENST00000449336 292 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC234775.1-201ENST00000454247 670 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 FCF1P3-201ENST00000496394 590 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC034159.1-201ENST00000513885 583 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AP001804.3-201ENST00000525146 880 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 DUXAP6-201ENST00000553858 601 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL163153.1-201ENST00000554223 283 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 VN1R92P-201ENST00000598511 928 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 BNIP3P33-201ENST00000598912 569 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 BDH2P1-201ENST00000602288 736 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC011451.2-201ENST00000604303 598 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC092354.2-201ENST00000607786 514 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC024560.3-201ENST00000608482 349 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC009464.1-201ENST00000615731 469 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 MIR7153-201ENST00000637758 57 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 AC007656.2-201ENST00000624902 4547 ntBASIC3.29□□□□□ -1.88
UBQLN3Q9H347 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
UBQLN3Q9H347 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 Y_RNA.18-201ENST00000362461 102 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 RNA5SP88-201ENST00000365560 109 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 MIR184-201ENST00000384962 84 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC119751.3-201ENST00000399720 670 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AL158071.1-201ENST00000430315 461 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 OR6K5P-201ENST00000447050 945 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 RPL30P9-201ENST00000465586 330 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC084357.1-201ENST00000473404 255 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 LINC00888-204ENST00000487386 421 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AP001025.2-201ENST00000490908 477 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AP006245.1-201ENST00000522549 120 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AP000926.4-201ENST00000527351 454 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AL158211.1-201ENST00000566763 763 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AL353997.4-201ENST00000586196 166 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC010591.1-201ENST00000603941 649 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC072039.2-201ENST00000608883 439 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 RMST_8.1-201ENST00000610287 165 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC068831.7-201ENST00000616954 363 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC018816.2-201ENST00000621460 353 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AC092628.2-201ENST00000622492 339 ntBASIC3.28□□□□□ -1.88
UBQLN3Q9H347 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.28□□□□□ -1.88
UBQLN3Q9H347 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
UBQLN3Q9H347 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBQLN3Q9H347 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
UBQLN3Q9H347 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.27□□□□□ -1.89
UBQLN3Q9H347 Y_RNA.548-201ENST00000384656 105 ntBASIC3.27□□□□□ -1.89
UBQLN3Q9H347 RNU6-882P-201ENST00000391025 103 ntBASIC3.27□□□□□ -1.89
UBQLN3Q9H347 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
UBQLN3Q9H347 RN7SKP53-201ENST00000411337 315 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms