Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 AC004825.2-201ENST00000616634 455 ntBASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 ADAM24P-201ENST00000398655 2101 ntBASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KRTAP3-1Q9BYR8 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 PRNCR1-201ENST00000635449 12727 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC110491.1-201ENST00000562191 2010 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 DEFB108F-201ENST00000344638 222 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP350-201ENST00000363298 111 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 SNORA38B-201ENST00000363524 131 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU5F-3P-201ENST00000363767 117 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU1-59P-201ENST00000364829 162 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 SNORA29-201ENST00000384183 140 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-376P-201ENST00000384731 106 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SKP137-201ENST00000411074 307 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 HMGA1P8-201ENST00000414130 321 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 Z85995.1-201ENST00000415547 335 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 SPATA20P1-201ENST00000423089 438 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RPS21P1-201ENST00000434479 247 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC009518.3-201ENST00000438972 253 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL263P-201ENST00000467969 290 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 TUBBP11-201ENST00000472255 252 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 CYCTP-201ENST00000504253 315 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 PDCD5P2-201ENST00000507570 312 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC093840.1-201ENST00000511599 336 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SKP67-201ENST00000515905 235 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1256P-201ENST00000516539 103 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1234P-201ENST00000516877 103 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP291-201ENST00000517222 105 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC009120.3-201ENST00000563335 499 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC048347.1-201ENST00000624621 427 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC008873.1-201ENST00000625051 138 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AL132640.3-201ENST00000630473 177 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 FKBP1AP4-201ENST00000631775 336 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AC074141.1-201ENST00000588129 2995 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 AL365440.1-201ENST00000436135 2167 ntBASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
KRTAP3-1Q9BYR8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
KRTAP3-1Q9BYR8 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
KRTAP3-1Q9BYR8 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms