Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 POU5F1P5-201ENST00000445059 658 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC118758.1-202ENST00000454719 225 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 RPS29P27-201ENST00000463711 170 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 PPIAP21-201ENST00000464473 501 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC074133.1-201ENST00000515696 183 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 RN7SKP183-201ENST00000517169 324 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 SNORD96A-201ENST00000606577 79 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 MIR6823-201ENST00000622118 61 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC091895.1-201ENST00000624494 256 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC073593.1-201ENST00000624500 411 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC073869.8-201ENST00000641806 335 ntBASIC5.72□□□□□ -1.49
USB1Q9BQ65 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USB1Q9BQ65 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.72□□□□□ -1.49
USB1Q9BQ65 RBBP8P1-201ENST00000449447 1844 ntBASIC5.71□□□□□ -1.49
USB1Q9BQ65 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.71□□□□□ -1.49
USB1Q9BQ65 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
USB1Q9BQ65 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.71□□□□□ -1.49
USB1Q9BQ65 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
USB1Q9BQ65 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
USB1Q9BQ65 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 SNORA25.1-201ENST00000362326 128 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 Y_RNA.123-201ENST00000363338 102 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 RN7SKP237-201ENST00000364663 301 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 Y_RNA.343-201ENST00000365354 112 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 RNU1-46P-201ENST00000384425 164 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 Y_RNA.497-201ENST00000384447 98 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 RNU6-1168P-201ENST00000390831 104 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 RN7SKP114-201ENST00000410327 279 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 RNU6-712P-201ENST00000410558 100 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 DPPA2P3-201ENST00000411853 655 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 AL592148.1-201ENST00000413568 445 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 RPL21P50-201ENST00000417698 477 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 CFL1P1-202ENST00000432948 411 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 LINC00328-2P-201ENST00000436585 219 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USB1Q9BQ65 RPL37P6-202ENST00000464216 403 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 TOMM22P6-201ENST00000465035 409 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 RN7SL799P-201ENST00000475891 298 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 RNU6-1219P-201ENST00000516143 112 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 RNA5SP471-201ENST00000516971 106 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 AC119403.2-201ENST00000590960 598 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 AC107294.1-201ENST00000609524 467 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USB1Q9BQ65 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 AC083843.2-201ENST00000568248 6253 ntBASIC5.71□□□□□ -1.5
USB1Q9BQ65 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USB1Q9BQ65 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USB1Q9BQ65 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.71□□□□□ -1.5
USB1Q9BQ65 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 AC007842.1-201ENST00000597336 2039 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 ZNF826P-207ENST00000622273 1910 ntBASIC5.7□□□□□ -1.5
USB1Q9BQ65 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
USB1Q9BQ65 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USB1Q9BQ65 MIR412-201ENST00000362142 91 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms