Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL592182.3-201ENST00000642132 3304 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 MTND4P14-201ENST00000435799 1354 ntBASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 MTND4P1-201ENST00000457501 1466 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 MTCO1P12-201ENST00000414273 1543 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.46-201ENST00000362695 102 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AL583835.1-201ENST00000399570 407 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.615-201ENST00000410769 117 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 ELOCP4-201ENST00000420090 333 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 NANOGP6-201ENST00000429190 847 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RPS29P17-201ENST00000430795 166 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 PPIAP13-201ENST00000434706 478 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RPS7P5-201ENST00000441482 581 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AL583843.1-201ENST00000456070 346 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 PPP1R2P5-201ENST00000457256 603 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU7-136P-201ENST00000458819 69 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-329P-201ENST00000459618 107 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SL303P-201ENST00000469773 251 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RPS4XP18-201ENST00000495480 763 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 MTND4LP22-201ENST00000508209 276 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 TTC39CP1-201ENST00000512513 755 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC108471.1-201ENST00000513977 287 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-1003P-201ENST00000517099 105 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 NARSP2-201ENST00000518524 679 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC022616.6-201ENST00000520479 119 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC123904.2-201ENST00000548059 300 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC068831.4-201ENST00000556118 109 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RPL7P50-201ENST00000600588 727 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AL359999.1-201ENST00000604513 294 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-87P-201ENST00000607561 108 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AC093913.1-201ENST00000614178 329 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 AL078596.1-201ENST00000624856 447 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 OR2L1P-202ENST00000641567 1023 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 OR11H5P-202ENST00000641612 1325 ntBASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.63□□□□□ -1.67
CDK5RAP1Q96SZ6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU1-63P-201ENST00000383902 164 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-26P-201ENST00000383985 107 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 RPL7P25-201ENST00000404151 721 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 SNORA11F-201ENST00000408237 128 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU4-25P-201ENST00000410569 230 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC073264.1-201ENST00000411508 416 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC011933.1-201ENST00000413334 321 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC009310.1-201ENST00000414414 451 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 ATP5JP1-201ENST00000431631 322 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 MTND5P22-201ENST00000458380 195 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC116533.1-201ENST00000459748 321 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC025674.1-201ENST00000507074 324 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC021146.3-201ENST00000511911 260 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 PTP4A1P4-201ENST00000512479 322 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 RNA5SP446-201ENST00000515955 82 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 SNORD116-26-201ENST00000516006 96 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU6-264P-201ENST00000517134 104 ntBASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.62□□□□□ -1.67
CDK5RAP1Q96SZ6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms