Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.54□□□□□ -2.16
GAFA1Q96PS6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 SNORA16.1-201ENST00000364597 132 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 RNU6-1180P-201ENST00000364935 107 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 SET-203ENST00000372688 801 ntTSL 2 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 MIR9-3-201ENST00000385084 90 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC092447.6-201ENST00000414578 210 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 HMGN2P3-201ENST00000433603 273 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 HMGN2P5-201ENST00000436882 273 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 RPL23AP23-201ENST00000452590 471 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 snoU13.15-201ENST00000459407 104 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 RPS29P12-201ENST00000460178 152 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 RNA5SP182-201ENST00000516064 82 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 RN7SKP234-201ENST00000517173 224 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 HMGN1P28-201ENST00000521340 364 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AP000873.5-201ENST00000533906 236 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 OR11H5P-201ENST00000554039 926 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 MTCYBP28-201ENST00000566728 1132 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 NRBF2P1-201ENST00000587407 859 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC020895.1-201ENST00000595362 272 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AL356280.1-201ENST00000603614 379 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 RPAP2P1-201ENST00000603626 1168 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC034236.3-201ENST00000605999 461 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AC093673.2-201ENST00000609674 331 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.53□□□□□ -2.16
GAFA1Q96PS6 AP003122.6-201ENST00000623831 495 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.53□□□□□ -2.16
GAFA1Q96PS6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
GAFA1Q96PS6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.17
GAFA1Q96PS6 AC091564.4-201ENST00000533934 2194 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 SNORA67.1-201ENST00000364749 141 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 RNU6-1140P-201ENST00000410517 106 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 RNU2-25P-201ENST00000411041 191 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AC004022.2-201ENST00000413824 193 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 MTND1P23-201ENST00000416931 372 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 VN1R31P-201ENST00000417498 730 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 RPS29P11-201ENST00000496507 171 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 NAMPTP2-201ENST00000505629 1115 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AC107393.1-201ENST00000512403 346 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 RNA5SP364-201ENST00000516938 78 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 DNAJC8P1-201ENST00000554535 372 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 HMGN2P28-201ENST00000606102 262 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AC005858.4-201ENST00000623191 700 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 AC026634.1-201ENST00000634369 198 ntBASIC1.52□□□□□ -2.17
GAFA1Q96PS6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
GAFA1Q96PS6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AL356292.1-201ENST00000283110 373 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 SNORA40.18-201ENST00000391200 128 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 SUMO2P12-201ENST00000405924 140 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 RNA5SP489-201ENST00000410986 109 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AC233981.1-201ENST00000423224 461 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AC010095.1-201ENST00000443543 144 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 snoU13.26-201ENST00000459452 105 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 RNU1-61P-201ENST00000516107 151 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 RN7SKP40-201ENST00000517211 242 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AC087808.1-201ENST00000520501 361 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 MTCYBP41-201ENST00000528913 1123 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AP003385.6-201ENST00000531603 374 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AL049838.1-201ENST00000563647 981 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 SNRPGP15-201ENST00000600149 222 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AL161912.3-201ENST00000605404 628 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 AC006329.2-201ENST00000611491 394 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.51□□□□□ -2.17
GAFA1Q96PS6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
GAFA1Q96PS6 PABPC1P7-201ENST00000413177 1513 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms