Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM41Q8WV44 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
TRIM41Q8WV44 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC8.66□□□□□ -1.02
TRIM41Q8WV44 AC109446.4-201ENST00000623235 2755 ntBASIC8.66□□□□□ -1.02
TRIM41Q8WV44 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM41Q8WV44 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
TRIM41Q8WV44 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRIM41Q8WV44 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 SAMMSON-210ENST00000641260 1308 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC009951.1-201ENST00000623674 2614 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC091812.1-201ENST00000432235 1948 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 RNU6-490P-201ENST00000362985 107 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 RNU6-278P-201ENST00000390945 109 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AL024474.1-201ENST00000404655 591 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC016559.2-201ENST00000510759 359 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 MIR3200-201ENST00000580767 85 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC092447.9-201ENST00000603395 144 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 AC010424.2-201ENST00000607594 443 ntBASIC8.65□□□□□ -1.02
TRIM41Q8WV44 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC8.65□□□□□ -1.02
TRIM41Q8WV44 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM41Q8WV44 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TRIM41Q8WV44 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AL731566.1-201ENST00000620490 1937 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 SNORA63.1-201ENST00000362493 131 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 Y_RNA.404-201ENST00000383978 102 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 SNORA19-201ENST00000384737 128 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 RNU6-713P-201ENST00000384761 107 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 PLGLA-201ENST00000465668 449 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AC068305.1-201ENST00000497406 726 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 HMGB3P17-201ENST00000504195 649 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 RNU6-189P-201ENST00000516120 101 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 RNU2-10P-201ENST00000516375 211 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AC078899.3-201ENST00000599065 212 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AC004805.2-201ENST00000605382 482 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AC023043.4-201ENST00000612081 449 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 AL138726.1-201ENST00000614873 333 ntBASIC8.64□□□□□ -1.03
TRIM41Q8WV44 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TRIM41Q8WV44 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 RNU1-94P-201ENST00000362627 173 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 RNU6-562P-201ENST00000362731 107 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 Y_RNA.152-201ENST00000363578 100 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 RNA5SP219-201ENST00000390940 113 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 SNORA48.4-201ENST00000391089 134 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 RNU6-1050P-201ENST00000410388 107 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 ATG3P1-201ENST00000419507 911 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AL162388.1-201ENST00000450912 352 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 HMGB3P30-201ENST00000457863 606 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 VN1R104P-201ENST00000505115 1009 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC116655.1-201ENST00000508324 901 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC116337.1-201ENST00000509680 687 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC105254.2-201ENST00000603636 436 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC025034.2-201ENST00000623264 286 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC009902.3-201ENST00000606235 2172 ntBASIC8.63□□□□□ -1.03
TRIM41Q8WV44 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TRIM41Q8WV44 AC134882.1-201ENST00000603738 1676 ntBASIC8.62□□□□□ -1.03
TRIM41Q8WV44 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM41Q8WV44 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM41Q8WV44 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TRIM41Q8WV44 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM41Q8WV44 Y_RNA.485-201ENST00000384395 102 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms