Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC011233.1-201ENST00000422812 283 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC092447.3-201ENST00000426027 686 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC104685.1-201ENST00000502445 371 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 RNA5SP468-201ENST00000516782 93 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 SCARNA20.6-201ENST00000517251 106 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC026407.1-201ENST00000518369 204 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 HSPE1P5-201ENST00000561489 272 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 MTCO3P24-201ENST00000572729 782 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC136618.2-201ENST00000575091 400 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 RN7SL703P-201ENST00000578485 302 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AL353997.4-201ENST00000586196 166 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC067852.3-201ENST00000589177 561 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC008751.2-201ENST00000597885 980 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC006539.2-201ENST00000601729 572 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 BBIP1P1-201ENST00000602999 279 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AL133393.1-201ENST00000603277 287 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AL451086.1-201ENST00000605596 223 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AL391497.1-201ENST00000608671 547 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC008147.4-201ENST00000617570 1204 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC131159.1-201ENST00000621854 213 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 AC009039.2-201ENST00000624524 529 ntBASIC3.38□□□□□ -1.87
CCDC63Q8NA47 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC63Q8NA47 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 RNU6-1155P-201ENST00000363554 107 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 Y_RNA.234-201ENST00000364409 97 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 PPIAP31-201ENST00000405422 495 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 RPL32P35-201ENST00000415214 394 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 VPS26BP1-201ENST00000417155 755 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AL593851.1-201ENST00000426171 157 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 DPPA2P1-201ENST00000428060 556 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 RPL7P34-201ENST00000433316 712 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 RPL23AP35-201ENST00000451906 501 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 SBDSP1-204ENST00000453858 737 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC091179.1-201ENST00000461606 579 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 RPL7P5-201ENST00000471472 736 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC108860.1-201ENST00000484521 383 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC098862.1-201ENST00000504991 413 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC017037.2-201ENST00000513850 890 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC239860.2-201ENST00000525886 270 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 MTATP6P15-201ENST00000527233 835 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 OR8R1P-201ENST00000543943 764 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 ELOCP32-201ENST00000548625 324 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC084824.1-201ENST00000550917 1005 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC002400.1-201ENST00000569310 726 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 ISCA1P3-201ENST00000577104 373 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC021171.1-201ENST00000603137 706 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC106791.2-201ENST00000604680 391 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC015967.1-201ENST00000619893 476 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AL360181.4-201ENST00000621752 134 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC120349.3-201ENST00000624377 529 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 RNA5SP196-201ENST00000625967 102 ntBASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC63Q8NA47 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms