Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNU6-933P-201ENST00000384424 107 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AL591034.2-201ENST00000402839 359 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AL603908.1-201ENST00000406098 201 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RNA5SP431-201ENST00000410312 120 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AF186996.5-201ENST00000418098 904 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 VTI1BP4-201ENST00000427516 527 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 USP9YP7-201ENST00000436723 430 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RPL21P2-201ENST00000440049 481 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 CHEK2P4-201ENST00000450340 246 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 USP9YP32-201ENST00000452432 430 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC108860.1-201ENST00000484521 383 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RNU6-1143P-201ENST00000516125 104 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 OR5D17P-201ENST00000531492 978 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 CBX3P8-201ENST00000532412 525 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC022884.2-201ENST00000578535 580 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC125232.2-201ENST00000592457 143 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 VN1R91P-201ENST00000594377 169 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AL162431.4-201ENST00000604674 411 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC011626.1-201ENST00000604710 562 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC004805.2-201ENST00000605382 482 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 HMGB1P50-201ENST00000605814 607 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RNA5SP108-201ENST00000605921 117 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC141002.1-201ENST00000607025 279 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RN7SL261P-201ENST00000613441 282 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC099669.2-201ENST00000616549 437 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AC015967.1-201ENST00000619893 476 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 SNORD39.4-201ENST00000620099 78 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 FP236240.3-201ENST00000623061 327 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 AL512643.1-201ENST00000635735 524 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 U6.104-201ENST00000637979 90 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 SAMMSON-213ENST00000641336 1521 ntBASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
DEPDC4Q8N2C3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AC083843.2-201ENST00000568248 6253 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RNU4-44P-201ENST00000363050 141 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RNU1-49P-201ENST00000363468 159 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RNU6-1074P-201ENST00000383995 104 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RNU6-1179P-201ENST00000384667 107 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 MIR625-201ENST00000385047 85 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RNU6-325P-201ENST00000411132 105 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AC016769.2-201ENST00000414815 475 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RBMY1KP-201ENST00000423480 476 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AL353997.1-201ENST00000432936 108 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RPL5P7-201ENST00000444235 813 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 TDGF1P1-201ENST00000445734 527 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AL359073.1-201ENST00000448036 403 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 OR1H1P-201ENST00000448731 937 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 NDUFB4P9-201ENST00000511646 388 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 RN7SKP288-201ENST00000516227 268 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 MIR892C-201ENST00000516410 77 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AC144568.1-201ENST00000520139 137 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 IGHV3-76-201ENST00000522465 295 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 TRAV32-201ENST00000553993 340 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 AC012254.3-201ENST00000591183 2117 ntBASIC5.52□□□□□ -1.53
DEPDC4Q8N2C3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms