Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 RNU2-58P-201ENST00000516403 183 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC006362.1-201ENST00000567392 174 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 MIR4307-201ENST00000582802 84 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 MIR5187-201ENST00000583479 76 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC098679.4-201ENST00000624241 654 ntBASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.11□□□□□ -1.75
VPS52Q8N1B4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 IPO8P1-201ENST00000455509 3109 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 RNA5SP189-201ENST00000364920 115 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 MIR153-1-201ENST00000384914 90 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 MIR34B-201ENST00000385076 84 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC109780.2-201ENST00000413467 845 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 MTCYBP24-201ENST00000420387 1106 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 MTCO2P34-201ENST00000421994 607 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC005517.2-201ENST00000424673 553 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 CYCSP43-201ENST00000438233 310 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 PRDX3P3-201ENST00000447765 522 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AL445669.2-201ENST00000454425 421 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 OR6K1P-201ENST00000456766 971 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AP001992.1-205ENST00000462248 379 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC092451.1-201ENST00000480211 153 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC106707.2-201ENST00000484182 374 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC005921.1-201ENST00000510589 286 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC079140.3-201ENST00000511111 550 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC034159.1-201ENST00000513885 583 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 BBIP1P1-201ENST00000602999 279 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 PRELID3BP8-201ENST00000604148 295 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC110741.2-201ENST00000605278 268 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 U3.45-201ENST00000607547 219 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AC096577.2-201ENST00000611455 153 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 AL596245.1-201ENST00000618994 362 ntBASIC4.1□□□□□ -1.75
VPS52Q8N1B4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS52Q8N1B4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 SNORA31-201ENST00000362607 130 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 RNU6-525P-201ENST00000363685 104 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 U8.14-201ENST00000390843 143 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 PTMAP5-201ENST00000393073 333 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 CDK8P2-201ENST00000415020 547 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 ZNF885P-201ENST00000420174 1098 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 ATP5HP2-201ENST00000433885 485 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 HMGB1P37-201ENST00000439613 609 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 RPS3AP12-201ENST00000443616 753 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 USP9YP29-201ENST00000445112 563 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 GDI2P2-201ENST00000445131 608 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AP000542.1-201ENST00000448473 371 ntBASIC4.09□□□□□ -1.75
VPS52Q8N1B4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS52Q8N1B4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms