Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC068870.1-201ENST00000563737 2455 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC005042.1-201ENST00000393397 800 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 EIF4EP2-201ENST00000422816 654 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 GAPDHP27-201ENST00000447427 1020 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AL136097.1-201ENST00000456945 913 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 RN7SL72P-201ENST00000460697 269 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC006511.1-201ENST00000470614 315 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC022034.3-201ENST00000471393 478 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 Y_RNA.689-201ENST00000516589 107 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC087441.2-201ENST00000529141 262 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 MIR4311-201ENST00000580794 100 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 MIR3176-201ENST00000582210 90 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC006363.1-201ENST00000603806 463 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC025588.3-201ENST00000604182 274 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 SDR42E1P1-201ENST00000611327 477 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC091953.5-201ENST00000622919 233 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 AC104964.3-201ENST00000606115 2860 ntBASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LYSMD3Q7Z3D4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-1303P-201ENST00000364841 107 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-637P-201ENST00000384050 107 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-45P-201ENST00000384471 107 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-790P-201ENST00000384479 105 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 MIR628-201ENST00000385229 95 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 BMS1P17-202ENST00000416720 316 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 DAP3P1-201ENST00000441522 278 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AP000281.1-201ENST00000444036 316 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 snoU13.7-201ENST00000459220 104 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 RPS29P26-201ENST00000477483 171 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 RNU6-911P-201ENST00000516523 104 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 OR10G5P-201ENST00000532733 358 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AP002392.1-201ENST00000537692 208 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC004584.2-201ENST00000570407 410 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 MIR4505-201ENST00000582238 73 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC005191.1-201ENST00000603950 358 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 MZT1P2-201ENST00000604387 248 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC007998.5-201ENST00000622938 237 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 AC010266.2-201ENST00000564741 3255 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 PANDAR-201ENST00000629595 1506 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 MAPK10-328ENST00000641553 4009 ntBASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
LYSMD3Q7Z3D4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 AC018809.2-201ENST00000602436 3823 ntBASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LYSMD3Q7Z3D4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms