Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC022882.1-201ENST00000532142 501 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 GLYCAM1-201ENST00000546596 285 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AL512310.1-201ENST00000548639 172 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.76□□□□□ -1.65
KRT40Q6A162 RPL23AP87-202ENST00000573039 466 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 UBE2V2P2-201ENST00000587677 504 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.76□□□□□ -1.65
KRT40Q6A162 BBIP1P1-201ENST00000602999 279 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 RNU6-87P-201ENST00000607561 108 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AL391813.2-201ENST00000609113 322 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC015813.4-201ENST00000610469 179 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 AC139792.3-201ENST00000623525 224 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AL049780.3-201ENST00000624612 1583 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRT40Q6A162 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.76□□□□□ -1.65
KRT40Q6A162 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.76□□□□□ -1.65
KRT40Q6A162 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRT40Q6A162 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRT40Q6A162 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
KRT40Q6A162 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.75□□□□□ -1.65
KRT40Q6A162 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 XPOTP1-201ENST00000443317 2398 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC016588.2-201ENST00000632484 3021 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 AL031679.1-201ENST00000400616 525 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.75□□□□□ -1.65
KRT40Q6A162 RPL21P65-201ENST00000406094 466 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AL023807.1-201ENST00000407932 359 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AL160275.2-201ENST00000412010 394 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 MTND1P14-201ENST00000427400 950 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 ELOCP18-201ENST00000434209 337 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC007389.2-201ENST00000434630 306 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 SDCBPP1-201ENST00000440192 890 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC243772.1-201ENST00000451620 410 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.75□□□□□ -1.65
KRT40Q6A162 MTND1P12-201ENST00000455231 147 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 RPL36AP13-201ENST00000457490 317 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 RNU6-420P-201ENST00000458780 107 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 RPL23AP2-201ENST00000471227 466 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 FAM172BP-201ENST00000487497 1089 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 RNU7-143P-201ENST00000516781 65 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC123904.2-201ENST00000548059 300 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC009101.1-201ENST00000568135 242 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AC053481.4-201ENST00000583164 216 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC068790.5-201ENST00000602741 355 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC016727.1-205ENST00000605437 569 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC023813.4-201ENST00000607580 580 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC131238.1-201ENST00000617135 328 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 MIR7151-201ENST00000617477 60 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC007742.2-201ENST00000618226 398 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AL359697.1-201ENST00000624879 587 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 AC012442.3-202ENST00000636742 206 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 MIR3662-201ENST00000637030 95 ntBASIC4.75□□□□□ -1.65
KRT40Q6A162 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
KRT40Q6A162 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.75□□□□□ -1.65
KRT40Q6A162 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRT40Q6A162 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.75□□□□□ -1.65
KRT40Q6A162 AL450326.2-201ENST00000421913 1962 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRT40Q6A162 RLIMP1-201ENST00000339626 1680 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
KRT40Q6A162 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRT40Q6A162 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KRT40Q6A162 RNU4-1-201ENST00000363925 141 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
KRT40Q6A162 MIR200C-201ENST00000384980 68 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 RN7SKP285-201ENST00000410137 318 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 RNU6-908P-201ENST00000410160 94 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AL359704.1-201ENST00000411586 781 ntBASIC4.74□□□□□ -1.65
KRT40Q6A162 AC073136.2-201ENST00000417282 849 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms