Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC013476.2-201ENST00000614456 459 ntBASIC4.63□□□□□ -1.67
LONRF3Q496Y0 AF117829.1-206ENST00000621883 3802 ntBASIC4.63□□□□□ -1.67
LONRF3Q496Y0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LONRF3Q496Y0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.63□□□□□ -1.67
LONRF3Q496Y0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.63□□□□□ -1.67
LONRF3Q496Y0 RLIMP1-201ENST00000339626 1680 ntBASIC4.63□□□□□ -1.67
LONRF3Q496Y0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LONRF3Q496Y0 AC024560.2-201ENST00000507981 1497 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 Z82217.1-201ENST00000625157 8149 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 PRO1804-201ENST00000623780 2050 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 RNU11-4P-201ENST00000391149 133 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 RN7SKP33-201ENST00000410942 340 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 HMGN1P14-201ENST00000412459 517 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 JKAMPP1-201ENST00000413804 919 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC007390.1-201ENST00000415722 356 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC011742.1-201ENST00000431448 434 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AL353691.1-201ENST00000451332 387 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 HMGB3P22-202ENST00000451823 572 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC093899.1-201ENST00000457984 376 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 RPL9P33-201ENST00000484311 566 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC106872.3-201ENST00000495104 446 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC109464.2-201ENST00000510242 943 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC021146.1-201ENST00000511202 716 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC093677.1-201ENST00000514414 678 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC099522.1-202ENST00000514718 367 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 IGKV2-23-201ENST00000518729 323 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 ZNF519P3-201ENST00000557158 1032 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC034105.4-201ENST00000568304 277 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC012417.1-201ENST00000582307 1039 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 MIR544B-201ENST00000582372 78 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AP001029.3-201ENST00000588063 596 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AP001330.4-201ENST00000604350 154 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 TUG1_1.1-201ENST00000610654 145 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC092794.1-201ENST00000612734 582 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AL603839.4-201ENST00000624658 1005 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC068137.3-201ENST00000639191 341 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 AC073869.6-201ENST00000640656 341 ntBASIC4.62□□□□□ -1.67
LONRF3Q496Y0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LONRF3Q496Y0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL161781.1-201ENST00000354277 403 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 RN7SKP280-201ENST00000364196 304 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 RPL21P65-201ENST00000406094 466 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL356583.2-201ENST00000426536 280 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 OR2B8P-201ENST00000432841 938 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL121871.1-201ENST00000443413 436 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 GDI2P2-201ENST00000445131 608 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 HSFY6P-201ENST00000445573 403 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 PDSS1P2-201ENST00000449397 678 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 RNA5SP246-201ENST00000458909 119 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 SNORD42A-201ENST00000459584 64 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 RPL7P47-201ENST00000497299 556 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC024589.1-201ENST00000512207 263 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC016957.1-201ENST00000534895 309 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC018630.1-201ENST00000541376 925 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 MIR5697-201ENST00000578045 78 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 FAM60BP-201ENST00000578364 658 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL590099.1-201ENST00000615276 138 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 MIR6875-201ENST00000617506 72 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL596245.1-201ENST00000618994 362 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AC015967.1-201ENST00000619893 476 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL445264.1-201ENST00000621719 171 ntBASIC4.61□□□□□ -1.67
LONRF3Q496Y0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.61□□□□□ -1.67
LONRF3Q496Y0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms