Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC004062.1-201ENST00000509926 645 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 FAM92A1P1-201ENST00000528023 890 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC027807.1-201ENST00000559921 996 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 TPRKBP2-201ENST00000565969 475 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC006270.2-201ENST00000578523 652 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC105224.1-201ENST00000587055 421 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC006116.10-201ENST00000591836 581 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AP002360.3-201ENST00000607673 710 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC020634.1-201ENST00000608701 549 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC004067.1-201ENST00000608733 700 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC103710.2-201ENST00000609912 942 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 SNHG22-203ENST00000617833 660 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC092326.2-201ENST00000624772 1561 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 AC016588.2-201ENST00000632484 3021 ntBASIC5.1□□□□□ -1.59
CCDC144BQ3MJ40 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 MAPK10-253ENST00000641010 4072 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 OR5P1P-201ENST00000299512 925 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 OR4G2P-201ENST00000328113 903 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 SNORD56.2-201ENST00000363242 71 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 SNORA23-201ENST00000365128 182 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-76P-201ENST00000384060 104 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 RPL17P50-201ENST00000396131 546 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AL136372.1-201ENST00000403060 228 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 RNA5SP239-201ENST00000410218 129 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 USP12PX-201ENST00000432383 1057 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AL662791.1-201ENST00000441992 928 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 RPL23AP43-201ENST00000446445 471 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 RPS11P1-201ENST00000451072 473 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC008481.1-201ENST00000463278 396 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 RPL23AP65-201ENST00000475608 468 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AL117351.2-201ENST00000513571 157 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 RNU7-51P-201ENST00000516560 62 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AP003730.1-201ENST00000524605 285 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AP001893.2-201ENST00000526949 202 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AP004242.1-201ENST00000533701 349 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AP003034.1-201ENST00000534621 422 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC123904.3-201ENST00000547218 814 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC010201.1-201ENST00000605051 540 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC126118.1-201ENST00000607744 628 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC015813.4-201ENST00000610469 179 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 C2orf27A-204ENST00000623058 969 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 MIR3653-201ENST00000625572 110 ntBASIC5.09□□□□□ -1.59
CCDC144BQ3MJ40 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC144BQ3MJ40 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC144BQ3MJ40 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC144BQ3MJ40 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC067945.1-201ENST00000342609 618 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 SNORA31-201ENST00000362607 130 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 TXNP7-201ENST00000406296 293 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 SNRPFP1-201ENST00000414761 252 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC024082.2-201ENST00000434771 238 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 OR4C10P-201ENST00000434991 931 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 RPS26P28-201ENST00000470806 348 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC041039.1-201ENST00000485656 536 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC108022.1-201ENST00000493466 478 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 RNU6-410P-201ENST00000517006 107 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 RNU6-1073P-201ENST00000517182 106 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 MIR2116-201ENST00000517221 80 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 MTND4LP26-201ENST00000518144 282 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.08□□□□□ -1.6
CCDC144BQ3MJ40 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms