Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.53□□□□□ -1.85
PTCH1Q13635 MTND5P21-201ENST00000531961 522 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 OR11H5P-201ENST00000554039 926 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.53□□□□□ -1.85
PTCH1Q13635 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.53□□□□□ -1.85
PTCH1Q13635 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.53□□□□□ -1.85
PTCH1Q13635 AC016727.1-205ENST00000605437 569 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.53□□□□□ -1.85
PTCH1Q13635 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.53□□□□□ -1.85
PTCH1Q13635 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
PTCH1Q13635 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PTCH1Q13635 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCH1Q13635 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.52□□□□□ -1.85
PTCH1Q13635 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCH1Q13635 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCH1Q13635 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCH1Q13635 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCH1Q13635 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
PTCH1Q13635 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PTCH1Q13635 SNORA51.4-201ENST00000364993 124 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 Y_RNA.493-201ENST00000384422 102 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 SNORD65C-201ENST00000390962 71 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 BTF3P7-201ENST00000407097 488 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.52□□□□□ -1.85
PTCH1Q13635 NANOGP5-201ENST00000424456 877 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCH1Q13635 RPL17P35-201ENST00000432217 549 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.52□□□□□ -1.85
PTCH1Q13635 snoU13.3-201ENST00000459441 104 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
PTCH1Q13635 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.52□□□□□ -1.85
PTCH1Q13635 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.52□□□□□ -1.85
PTCH1Q13635 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCH1Q13635 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.52□□□□□ -1.85
PTCH1Q13635 AC010620.2-201ENST00000600135 313 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 AC069234.5-201ENST00000611056 416 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCH1Q13635 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCH1Q13635 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 OR4G2P-202ENST00000641004 1759 ntBASIC3.52□□□□□ -1.85
PTCH1Q13635 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.51□□□□□ -1.85
PTCH1Q13635 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PTCH1Q13635 RNU6-263P-201ENST00000363811 107 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.51□□□□□ -1.85
PTCH1Q13635 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCH1Q13635 MIR649-201ENST00000384843 97 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCH1Q13635 TOMM22P1-201ENST00000418578 312 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.51□□□□□ -1.85
PTCH1Q13635 AC012498.1-201ENST00000424037 437 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.51□□□□□ -1.85
PTCH1Q13635 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.51□□□□□ -1.85
PTCH1Q13635 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.51□□□□□ -1.85
PTCH1Q13635 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.51□□□□□ -1.85
PTCH1Q13635 RN7SL636P-201ENST00000497504 294 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCH1Q13635 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCH1Q13635 HMGB3P15-201ENST00000507326 574 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.51□□□□□ -1.85
PTCH1Q13635 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.51□□□□□ -1.85
PTCH1Q13635 AL590282.1-201ENST00000610379 1136 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 AC107871.2-201ENST00000612894 502 ntBASIC3.51□□□□□ -1.85
PTCH1Q13635 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCH1Q13635 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCH1Q13635 AC007256.1-201ENST00000392253 2765 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 RNU6-629P-201ENST00000384061 103 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 TMSB4XP8-201ENST00000402089 135 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PTCH1Q13635 RNA5SP56-201ENST00000410277 118 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 TMSB4XP6-201ENST00000415187 135 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 AC007390.1-201ENST00000415722 356 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 SDCBPP3-201ENST00000419629 891 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCH1Q13635 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCH1Q13635 TMSB4XP1-201ENST00000424567 135 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.5□□□□□ -1.85
PTCH1Q13635 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCH1Q13635 HMGN2P23-201ENST00000456759 269 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 ADAM3A-203ENST00000461344 2157 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 AC078857.1-201ENST00000469870 667 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 RN7SL297P-201ENST00000483161 293 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PTCH1Q13635 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCH1Q13635 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.5□□□□□ -1.85
PTCH1Q13635 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.5□□□□□ -1.85
PTCH1Q13635 AC027338.1-201ENST00000514840 825 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.5□□□□□ -1.85
PTCH1Q13635 AC087272.1-201ENST00000523624 533 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 RANP3-201ENST00000530970 276 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.5□□□□□ -1.85
PTCH1Q13635 SYF2P1-201ENST00000550658 413 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 AC009163.5-201ENST00000575421 637 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 AC124283.4-201ENST00000581815 456 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 AL669831.4-202ENST00000590817 238 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 AC025588.3-201ENST00000604182 274 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PTCH1Q13635 AL590396.4-201ENST00000636779 956 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 U6.98-201ENST00000637157 84 ntBASIC3.5□□□□□ -1.85
PTCH1Q13635 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms