Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UBA52P62987 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
UBA52P62987 AL512646.1-201ENST00000269395 1077 ntBASIC1.94□□□□□ -2.1
UBA52P62987 HSPE1P11-201ENST00000339579 310 ntBASIC1.94□□□□□ -2.1
UBA52P62987 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
UBA52P62987 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UBA52P62987 RNU6-253P-201ENST00000384730 105 ntBASIC1.94□□□□□ -2.1
UBA52P62987 DNAJC19P6-201ENST00000401853 280 ntBASIC1.94□□□□□ -2.1
UBA52P62987 AL606495.1-201ENST00000422100 813 ntBASIC1.94□□□□□ -2.1
UBA52P62987 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
UBA52P62987 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.94□□□□□ -2.1
UBA52P62987 AC004263.1-201ENST00000479327 332 ntBASIC1.94□□□□□ -2.1
UBA52P62987 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.94□□□□□ -2.1
UBA52P62987 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.94□□□□□ -2.1
UBA52P62987 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.94□□□□□ -2.1
UBA52P62987 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UBA52P62987 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.94□□□□□ -2.1
UBA52P62987 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.94□□□□□ -2.1
UBA52P62987 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
UBA52P62987 SNORA35B-201ENST00000607417 129 ntBASIC1.94□□□□□ -2.1
UBA52P62987 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UBA52P62987 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.94□□□□□ -2.1
UBA52P62987 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
UBA52P62987 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
UBA52P62987 AC087565.3-202ENST00000642085 1603 ntBASIC1.93□□□□□ -2.1
UBA52P62987 AL596028.1-201ENST00000326971 197 ntBASIC1.93□□□□□ -2.1
UBA52P62987 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UBA52P62987 BTF3P7-201ENST00000407097 488 ntBASIC1.93□□□□□ -2.1
UBA52P62987 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.93□□□□□ -2.1
UBA52P62987 RNU4-26P-201ENST00000410270 107 ntBASIC1.93□□□□□ -2.1
UBA52P62987 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.93□□□□□ -2.1
UBA52P62987 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 PGBD4P3-201ENST00000440731 581 ntBASIC1.93□□□□□ -2.1
UBA52P62987 Z99127.2-201ENST00000441426 334 ntBASIC1.93□□□□□ -2.1
UBA52P62987 RPS24P6-201ENST00000452670 400 ntBASIC1.93□□□□□ -2.1
UBA52P62987 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UBA52P62987 LINC00888-204ENST00000487386 421 ntBASIC1.93□□□□□ -2.1
UBA52P62987 AC108210.2-201ENST00000503681 201 ntBASIC1.93□□□□□ -2.1
UBA52P62987 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 AC025768.1-201ENST00000510057 267 ntBASIC1.93□□□□□ -2.1
UBA52P62987 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.93□□□□□ -2.1
UBA52P62987 AC105914.1-201ENST00000511798 226 ntBASIC1.93□□□□□ -2.1
UBA52P62987 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UBA52P62987 RANP3-201ENST00000530970 276 ntBASIC1.93□□□□□ -2.1
UBA52P62987 AL442163.2-201ENST00000553912 710 ntBASIC1.93□□□□□ -2.1
UBA52P62987 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.93□□□□□ -2.1
UBA52P62987 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 AC103810.6-201ENST00000606708 136 ntBASIC1.93□□□□□ -2.1
UBA52P62987 VN1R74P-201ENST00000613259 503 ntBASIC1.93□□□□□ -2.1
UBA52P62987 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.93□□□□□ -2.1
UBA52P62987 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.92□□□□□ -2.1
UBA52P62987 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UBA52P62987 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
UBA52P62987 MIR1289-2-201ENST00000408360 111 ntBASIC1.92□□□□□ -2.1
UBA52P62987 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.92□□□□□ -2.1
UBA52P62987 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.92□□□□□ -2.1
UBA52P62987 AC096638.1-201ENST00000444678 216 ntBASIC1.92□□□□□ -2.1
UBA52P62987 IFNA11P-201ENST00000446352 526 ntBASIC1.92□□□□□ -2.1
UBA52P62987 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.92□□□□□ -2.1
UBA52P62987 HMGB1P15-201ENST00000453854 435 ntBASIC1.92□□□□□ -2.1
UBA52P62987 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UBA52P62987 RPL30P9-201ENST00000465586 330 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC108734.3-201ENST00000481241 1165 ntBASIC1.92□□□□□ -2.1
UBA52P62987 MTND3P6-201ENST00000485242 339 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.92□□□□□ -2.1
UBA52P62987 XKRY-201ENST00000510392 1100 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.92□□□□□ -2.1
UBA52P62987 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
UBA52P62987 MTCO1P47-201ENST00000523889 1271 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AP001317.1-201ENST00000531194 960 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC008083.2-201ENST00000546707 476 ntBASIC1.92□□□□□ -2.1
UBA52P62987 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.92□□□□□ -2.1
UBA52P62987 YWHAZP1-201ENST00000556286 722 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC105137.2-201ENST00000569073 466 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC090312.2-201ENST00000582687 378 ntBASIC1.92□□□□□ -2.1
UBA52P62987 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AL713998.2-201ENST00000604538 1198 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC106791.2-201ENST00000604680 391 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.92□□□□□ -2.1
UBA52P62987 AL391834.1-201ENST00000609609 560 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC046143.2-201ENST00000609789 160 ntBASIC1.92□□□□□ -2.1
UBA52P62987 AC013562.2-201ENST00000611632 603 ntBASIC1.92□□□□□ -2.1
UBA52P62987 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.92□□□□□ -2.1
UBA52P62987 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
UBA52P62987 MIR1291-201ENST00000627649 87 ntBASIC1.92□□□□□ -2.1
UBA52P62987 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
UBA52P62987 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
UBA52P62987 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.92□□□□□ -2.1
UBA52P62987 AC104454.1-201ENST00000421341 1401 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.91□□□□□ -2.1
UBA52P62987 RPL26P37-201ENST00000411983 438 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.91□□□□□ -2.1
UBA52P62987 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
UBA52P62987 PSMA2P3-201ENST00000429685 675 ntBASIC1.91□□□□□ -2.1
UBA52P62987 AL591806.2-201ENST00000433122 173 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms