Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-1249P-201ENST00000363237 111 ntBASIC3.47□□□□□ -1.85
PDX1P52945 RNU6-744P-201ENST00000365557 107 ntBASIC3.47□□□□□ -1.85
PDX1P52945 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 RNU6-629P-201ENST00000384061 103 ntBASIC3.47□□□□□ -1.85
PDX1P52945 RNU6-1316P-201ENST00000384242 108 ntBASIC3.47□□□□□ -1.85
PDX1P52945 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PDX1P52945 RPS15AP38-201ENST00000413110 372 ntBASIC3.47□□□□□ -1.85
PDX1P52945 HMGB1P11-201ENST00000413899 637 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 AC244098.2-201ENST00000422068 99 ntBASIC3.47□□□□□ -1.85
PDX1P52945 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.47□□□□□ -1.85
PDX1P52945 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.47□□□□□ -1.85
PDX1P52945 AC017083.1-201ENST00000428093 483 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AC005300.1-201ENST00000428401 373 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AL390023.1-201ENST00000428836 262 ntBASIC3.47□□□□□ -1.85
PDX1P52945 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 MTND2P4-201ENST00000445034 1004 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AP000542.1-201ENST00000448473 371 ntBASIC3.47□□□□□ -1.85
PDX1P52945 RPL7P52-201ENST00000449200 742 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AL353691.1-201ENST00000451332 387 ntBASIC3.47□□□□□ -1.85
PDX1P52945 KATNBL1P6-201ENST00000453433 915 ntBASIC3.47□□□□□ -1.85
PDX1P52945 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 AC034159.1-201ENST00000513885 583 ntBASIC3.47□□□□□ -1.85
PDX1P52945 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 AC092851.1-201ENST00000535964 478 ntBASIC3.47□□□□□ -1.85
PDX1P52945 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 ROCK1P1-201ENST00000573767 549 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 AC090616.5-202ENST00000582111 297 ntBASIC3.47□□□□□ -1.85
PDX1P52945 MIR544B-201ENST00000582372 78 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AC006116.10-201ENST00000591836 581 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 BNIP3P23-201ENST00000599655 511 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AC004853.1-201ENST00000604902 698 ntBASIC3.47□□□□□ -1.85
PDX1P52945 BCRP9-201ENST00000605312 388 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AC093783.1-201ENST00000612976 329 ntBASIC3.47□□□□□ -1.85
PDX1P52945 MIR7844-201ENST00000616161 122 ntBASIC3.47□□□□□ -1.85
PDX1P52945 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.47□□□□□ -1.85
PDX1P52945 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.47□□□□□ -1.85
PDX1P52945 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PDX1P52945 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
PDX1P52945 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.47□□□□□ -1.85
PDX1P52945 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.47□□□□□ -1.85
PDX1P52945 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.46□□□□□ -1.85
PDX1P52945 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PDX1P52945 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
PDX1P52945 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDX1P52945 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 PABPC1P9-201ENST00000426076 1612 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AL672167.1-206ENST00000356293 943 ntBASIC3.46□□□□□ -1.86
PDX1P52945 RNU4-35P-201ENST00000362588 141 ntBASIC3.46□□□□□ -1.86
PDX1P52945 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.46□□□□□ -1.86
PDX1P52945 MIR320C1-201ENST00000408566 88 ntBASIC3.46□□□□□ -1.86
PDX1P52945 RN7SKP266-201ENST00000410232 287 ntBASIC3.46□□□□□ -1.86
PDX1P52945 RNU6-712P-201ENST00000410558 100 ntBASIC3.46□□□□□ -1.86
PDX1P52945 RHEBP3-201ENST00000411920 351 ntBASIC3.46□□□□□ -1.86
PDX1P52945 RPL7P8-201ENST00000411964 730 ntBASIC3.46□□□□□ -1.86
PDX1P52945 NPM1P11-201ENST00000417106 855 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.46□□□□□ -1.86
PDX1P52945 BX119904.4-201ENST00000424402 301 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.46□□□□□ -1.86
PDX1P52945 NDUFB1P1-201ENST00000435191 180 ntBASIC3.46□□□□□ -1.86
PDX1P52945 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 HMGB1P15-201ENST00000453854 435 ntBASIC3.46□□□□□ -1.86
PDX1P52945 RPS20P32-201ENST00000456044 356 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 AC109486.1-201ENST00000486833 374 ntBASIC3.46□□□□□ -1.86
PDX1P52945 COX7A2P2-201ENST00000505291 250 ntBASIC3.46□□□□□ -1.86
PDX1P52945 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.46□□□□□ -1.86
PDX1P52945 AC006390.1-201ENST00000508068 283 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AC117522.2-201ENST00000510049 657 ntBASIC3.46□□□□□ -1.86
PDX1P52945 GMPSP1-201ENST00000514075 579 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.46□□□□□ -1.86
PDX1P52945 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.46□□□□□ -1.86
PDX1P52945 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.46□□□□□ -1.86
PDX1P52945 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.46□□□□□ -1.86
PDX1P52945 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.46□□□□□ -1.86
PDX1P52945 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.46□□□□□ -1.86
PDX1P52945 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.46□□□□□ -1.86
PDX1P52945 AP005136.1-201ENST00000579765 429 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AL353997.4-201ENST00000586196 166 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.46□□□□□ -1.86
PDX1P52945 AC010620.1-201ENST00000601088 1102 ntBASIC3.46□□□□□ -1.86
PDX1P52945 XIAPP1-201ENST00000603162 600 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AL355812.1-201ENST00000603215 216 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AL358072.1-201ENST00000604156 575 ntBASIC3.46□□□□□ -1.86
PDX1P52945 Z94722.1-201ENST00000604328 474 ntBASIC3.46□□□□□ -1.86
PDX1P52945 AC110741.2-201ENST00000605278 268 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms