Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC099522.1-202ENST00000514718 367 ntBASIC4.27□□□□□ -1.73
NEK3P51956 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.27□□□□□ -1.73
NEK3P51956 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.27□□□□□ -1.73
NEK3P51956 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
NEK3P51956 RPL21P5-201ENST00000554662 472 ntBASIC4.27□□□□□ -1.73
NEK3P51956 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.27□□□□□ -1.73
NEK3P51956 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.27□□□□□ -1.73
NEK3P51956 AC055876.1-202ENST00000567053 138 ntBASIC4.27□□□□□ -1.73
NEK3P51956 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.27□□□□□ -1.73
NEK3P51956 uc_338.12-201ENST00000616344 181 ntBASIC4.27□□□□□ -1.73
NEK3P51956 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.27□□□□□ -1.73
NEK3P51956 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEK3P51956 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEK3P51956 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NEK3P51956 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NEK3P51956 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEK3P51956 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NEK3P51956 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.26□□□□□ -1.73
NEK3P51956 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NEK3P51956 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.26□□□□□ -1.73
NEK3P51956 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEK3P51956 AC118273.1-201ENST00000525324 3006 ntBASIC4.26□□□□□ -1.73
NEK3P51956 RNU5A-1-201ENST00000362698 116 ntBASIC4.26□□□□□ -1.73
NEK3P51956 RNA5SP479-201ENST00000364858 117 ntBASIC4.26□□□□□ -1.73
NEK3P51956 SNORA23-201ENST00000365128 182 ntBASIC4.26□□□□□ -1.73
NEK3P51956 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 SNORA37-201ENST00000384504 129 ntBASIC4.26□□□□□ -1.73
NEK3P51956 Y_RNA.553-201ENST00000384670 102 ntBASIC4.26□□□□□ -1.73
NEK3P51956 MRPL42P2-201ENST00000403169 426 ntBASIC4.26□□□□□ -1.73
NEK3P51956 RN7SKP263-201ENST00000411194 309 ntBASIC4.26□□□□□ -1.73
NEK3P51956 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.26□□□□□ -1.73
NEK3P51956 AL356867.1-201ENST00000429623 299 ntBASIC4.26□□□□□ -1.73
NEK3P51956 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.26□□□□□ -1.73
NEK3P51956 MTCO3P45-201ENST00000443036 613 ntBASIC4.26□□□□□ -1.73
NEK3P51956 CEACAMP4-201ENST00000457676 421 ntBASIC4.26□□□□□ -1.73
NEK3P51956 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 AL672167.3-201ENST00000465951 960 ntBASIC4.26□□□□□ -1.73
NEK3P51956 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.26□□□□□ -1.73
NEK3P51956 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.26□□□□□ -1.73
NEK3P51956 ACTR3P3-201ENST00000480448 893 ntBASIC4.26□□□□□ -1.73
NEK3P51956 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 AC010424.1-201ENST00000506336 297 ntBASIC4.26□□□□□ -1.73
NEK3P51956 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.26□□□□□ -1.73
NEK3P51956 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.26□□□□□ -1.73
NEK3P51956 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.26□□□□□ -1.73
NEK3P51956 AC024909.2-201ENST00000553035 286 ntBASIC4.26□□□□□ -1.73
NEK3P51956 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 AL157394.1-201ENST00000562983 1224 ntBASIC4.26□□□□□ -1.73
NEK3P51956 AC007599.1-201ENST00000568688 1174 ntBASIC4.26□□□□□ -1.73
NEK3P51956 AC009977.1-201ENST00000586015 570 ntBASIC4.26□□□□□ -1.73
NEK3P51956 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.26□□□□□ -1.73
NEK3P51956 AC008277.2-201ENST00000605196 797 ntBASIC4.26□□□□□ -1.73
NEK3P51956 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.26□□□□□ -1.73
NEK3P51956 AC245517.5-201ENST00000611529 162 ntBASIC4.26□□□□□ -1.73
NEK3P51956 AP001506.1-201ENST00000615444 211 ntBASIC4.26□□□□□ -1.73
NEK3P51956 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.26□□□□□ -1.73
NEK3P51956 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NEK3P51956 AC008013.2-202ENST00000637965 364 ntBASIC4.26□□□□□ -1.73
NEK3P51956 AC099654.13-201ENST00000639774 207 ntBASIC4.26□□□□□ -1.73
NEK3P51956 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEK3P51956 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NEK3P51956 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEK3P51956 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.26□□□□□ -1.73
NEK3P51956 MAPK10-372ENST00000641954 3413 ntBASIC4.25□□□□□ -1.73
NEK3P51956 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEK3P51956 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
NEK3P51956 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEK3P51956 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEK3P51956 SNORA36C-201ENST00000384289 132 ntBASIC4.25□□□□□ -1.73
NEK3P51956 MIR1193-201ENST00000408109 78 ntBASIC4.25□□□□□ -1.73
NEK3P51956 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
NEK3P51956 RNA5SP317-201ENST00000410176 116 ntBASIC4.25□□□□□ -1.73
NEK3P51956 RNA5SP311-201ENST00000411290 116 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.25□□□□□ -1.73
NEK3P51956 AC108032.1-201ENST00000416706 207 ntBASIC4.25□□□□□ -1.73
NEK3P51956 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.25□□□□□ -1.73
NEK3P51956 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.25□□□□□ -1.73
NEK3P51956 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.25□□□□□ -1.73
NEK3P51956 RAD23BP3-201ENST00000454157 1152 ntBASIC4.25□□□□□ -1.73
NEK3P51956 MTCO2P29-201ENST00000465212 189 ntBASIC4.25□□□□□ -1.73
NEK3P51956 SNRPGP3-201ENST00000469405 227 ntBASIC4.25□□□□□ -1.73
NEK3P51956 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEK3P51956 RPS29P19-201ENST00000479709 171 ntBASIC4.25□□□□□ -1.73
NEK3P51956 RPS15AP36-201ENST00000492022 382 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AC092104.1-201ENST00000497346 1441 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.25□□□□□ -1.73
NEK3P51956 AC109464.2-201ENST00000510242 943 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 RNA5SP315-201ENST00000516340 116 ntBASIC4.25□□□□□ -1.73
NEK3P51956 RNA5SP312-201ENST00000517068 116 ntBASIC4.25□□□□□ -1.73
NEK3P51956 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.25□□□□□ -1.73
NEK3P51956 AC007115.1-201ENST00000546853 234 ntBASIC4.25□□□□□ -1.73
NEK3P51956 CCNG2P1-201ENST00000549521 1000 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms