Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR5195-201ENST00000583555 115 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.53□□□□□ -1.84
LHX1P48742 AL162713.1-201ENST00000604480 262 ntBASIC3.53□□□□□ -1.84
LHX1P48742 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AL596245.1-201ENST00000618994 362 ntBASIC3.53□□□□□ -1.84
LHX1P48742 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.53□□□□□ -1.84
LHX1P48742 AC079416.3-201ENST00000624479 549 ntBASIC3.53□□□□□ -1.84
LHX1P48742 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LHX1P48742 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LHX1P48742 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
LHX1P48742 AP001350.1-201ENST00000601906 1524 ntBASIC3.53□□□□□ -1.84
LHX1P48742 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.53□□□□□ -1.84
LHX1P48742 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LHX1P48742 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
LHX1P48742 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LHX1P48742 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 AC011477.1-204ENST00000623416 1325 ntBASIC3.52□□□□□ -1.85
LHX1P48742 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 RPL21P132-201ENST00000331267 462 ntBASIC3.52□□□□□ -1.85
LHX1P48742 RNU6-600P-201ENST00000362524 99 ntBASIC3.52□□□□□ -1.85
LHX1P48742 RNU6-289P-201ENST00000364093 107 ntBASIC3.52□□□□□ -1.85
LHX1P48742 SNORA51.2-201ENST00000364595 132 ntBASIC3.52□□□□□ -1.85
LHX1P48742 RNU6-343P-201ENST00000364709 104 ntBASIC3.52□□□□□ -1.85
LHX1P48742 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
LHX1P48742 SNORA11.1-201ENST00000408133 129 ntBASIC3.52□□□□□ -1.85
LHX1P48742 PTP4A1P5-201ENST00000420305 455 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC092447.3-201ENST00000426027 686 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC006028.1-201ENST00000438379 402 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.52□□□□□ -1.85
LHX1P48742 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
LHX1P48742 MTND5P2-201ENST00000442927 1142 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AL606662.1-201ENST00000445763 553 ntBASIC3.52□□□□□ -1.85
LHX1P48742 MTND1P31-201ENST00000449206 961 ntBASIC3.52□□□□□ -1.85
LHX1P48742 PAXBP1P1-201ENST00000449315 447 ntBASIC3.52□□□□□ -1.85
LHX1P48742 RPS24P6-201ENST00000452670 400 ntBASIC3.52□□□□□ -1.85
LHX1P48742 Z82190.1-201ENST00000454534 490 ntBASIC3.52□□□□□ -1.85
LHX1P48742 ATG12P2-201ENST00000456830 416 ntBASIC3.52□□□□□ -1.85
LHX1P48742 RPL31P13-201ENST00000484151 370 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.52□□□□□ -1.85
LHX1P48742 HMGB1P22-201ENST00000505315 124 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC024589.1-201ENST00000512207 263 ntBASIC3.52□□□□□ -1.85
LHX1P48742 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 RNU6-1129P-201ENST00000515964 104 ntBASIC3.52□□□□□ -1.85
LHX1P48742 RNA5SP309-201ENST00000516670 106 ntBASIC3.52□□□□□ -1.85
LHX1P48742 RNU6-1073P-201ENST00000517182 106 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.52□□□□□ -1.85
LHX1P48742 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LHX1P48742 OR5D17P-201ENST00000531492 978 ntBASIC3.52□□□□□ -1.85
LHX1P48742 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.52□□□□□ -1.85
LHX1P48742 HIGD1AP1-201ENST00000550979 275 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.52□□□□□ -1.85
LHX1P48742 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.52□□□□□ -1.85
LHX1P48742 AC087481.2-201ENST00000565492 330 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.52□□□□□ -1.85
LHX1P48742 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.52□□□□□ -1.85
LHX1P48742 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 AC021171.1-201ENST00000603137 706 ntBASIC3.52□□□□□ -1.85
LHX1P48742 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC004853.1-201ENST00000604902 698 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC103710.3-201ENST00000608157 948 ntBASIC3.52□□□□□ -1.85
LHX1P48742 uc_338.1-201ENST00000612113 180 ntBASIC3.52□□□□□ -1.85
LHX1P48742 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.52□□□□□ -1.85
LHX1P48742 AC018816.2-201ENST00000621460 353 ntBASIC3.52□□□□□ -1.85
LHX1P48742 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LHX1P48742 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.52□□□□□ -1.85
LHX1P48742 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
LHX1P48742 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
LHX1P48742 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LHX1P48742 Y_RNA.18-201ENST00000362461 102 ntBASIC3.51□□□□□ -1.85
LHX1P48742 SNORA38.1-201ENST00000364172 131 ntBASIC3.51□□□□□ -1.85
LHX1P48742 RNU6-328P-201ENST00000390887 106 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AL356131.1-201ENST00000405826 414 ntBASIC3.51□□□□□ -1.85
LHX1P48742 RNU2-47P-201ENST00000410649 186 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.51□□□□□ -1.85
LHX1P48742 AC099677.1-201ENST00000420575 175 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC011233.1-201ENST00000422812 283 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.51□□□□□ -1.85
LHX1P48742 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.51□□□□□ -1.85
LHX1P48742 RPS3AP12-201ENST00000443616 753 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.51□□□□□ -1.85
LHX1P48742 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.51□□□□□ -1.85
LHX1P48742 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 AL353691.1-201ENST00000451332 387 ntBASIC3.51□□□□□ -1.85
LHX1P48742 BX510359.1-201ENST00000456973 237 ntBASIC3.51□□□□□ -1.85
LHX1P48742 snoU13.8-201ENST00000458890 104 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.51□□□□□ -1.85
LHX1P48742 AC068587.2-201ENST00000478386 781 ntBASIC3.51□□□□□ -1.85
LHX1P48742 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.51□□□□□ -1.85
LHX1P48742 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LHX1P48742 RPL23AP55-201ENST00000498163 452 ntBASIC3.51□□□□□ -1.85
LHX1P48742 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.51□□□□□ -1.85
LHX1P48742 PCBP2P3-201ENST00000509726 843 ntBASIC3.51□□□□□ -1.85
LHX1P48742 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms