Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC103881.1-201ENST00000603476 538 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AC021749.1-201ENST00000604322 607 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AC008083.4-201ENST00000615076 444 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AC073968.1-201ENST00000618594 637 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.28□□□□□ -1.88
BRCC3P46736 AC022509.4-201ENST00000621404 572 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.28□□□□□ -1.88
BRCC3P46736 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
BRCC3P46736 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRCC3P46736 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
BRCC3P46736 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCC3P46736 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
BRCC3P46736 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCC3P46736 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCC3P46736 Y_RNA.465-201ENST00000384293 102 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AL024474.1-201ENST00000404655 591 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 HSPE1P26-201ENST00000405341 275 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 RPS7P13-201ENST00000413955 498 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 RPS24P7-201ENST00000416921 246 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 SNORA59A-201ENST00000459326 152 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC108078.3-201ENST00000502633 489 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 AC104090.1-201ENST00000506341 1171 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRCC3P46736 AC116353.3-201ENST00000511215 249 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC119751.5-201ENST00000514077 770 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 RN7SKP272-201ENST00000516988 232 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 RNU6-1261P-201ENST00000517194 104 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 AP001636.2-201ENST00000525517 696 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 AC090695.1-201ENST00000561269 1222 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 ZNF192P1-203ENST00000565888 810 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCC3P46736 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 LARP7P2-201ENST00000575306 125 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 AC022022.2-201ENST00000602989 360 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC025588.2-201ENST00000604851 466 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC093732.2-201ENST00000607950 274 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.27□□□□□ -1.89
BRCC3P46736 AL451074.6-201ENST00000608512 729 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AP001521.1-201ENST00000609150 300 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC131235.4-201ENST00000609288 620 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 AC009318.4-201ENST00000620496 486 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 PLCE1P1-201ENST00000622094 305 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCC3P46736 AC048347.1-201ENST00000624621 427 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCC3P46736 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCC3P46736 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRCC3P46736 AC091152.2-201ENST00000591628 2569 ntBASIC3.27□□□□□ -1.89
BRCC3P46736 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRCC3P46736 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRCC3P46736 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.27□□□□□ -1.89
BRCC3P46736 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
BRCC3P46736 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.26□□□□□ -1.89
BRCC3P46736 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCC3P46736 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
BRCC3P46736 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BRCC3P46736 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCC3P46736 HIGD1AP15-201ENST00000416198 280 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCC3P46736 RPL21P112-201ENST00000434403 463 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 ISCA1P2-201ENST00000438679 421 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.26□□□□□ -1.89
BRCC3P46736 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.26□□□□□ -1.89
BRCC3P46736 SLC31A1P1-201ENST00000451221 567 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 RPL21P134-201ENST00000453468 483 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.26□□□□□ -1.89
BRCC3P46736 RPS29P26-201ENST00000477483 171 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.26□□□□□ -1.89
BRCC3P46736 OR4G11P-201ENST00000492842 939 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 HMGB1P22-201ENST00000505315 124 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 RNY4P37-201ENST00000516225 96 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 MTCYBP41-201ENST00000528913 1123 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.26□□□□□ -1.89
BRCC3P46736 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCC3P46736 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCC3P46736 H3F3AP1-201ENST00000559984 334 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.26□□□□□ -1.89
BRCC3P46736 AC022662.1-201ENST00000580252 331 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.26□□□□□ -1.89
BRCC3P46736 VN1R78P-201ENST00000597393 564 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AL390838.2-201ENST00000602394 274 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AC025588.3-201ENST00000604182 274 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCC3P46736 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AL139418.1-201ENST00000613613 177 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AC021755.4-201ENST00000616620 456 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AP000676.4-201ENST00000624659 623 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.26□□□□□ -1.89
BRCC3P46736 AC116618.1-201ENST00000634617 774 ntBASIC3.26□□□□□ -1.89
BRCC3P46736 AC006927.4-201ENST00000639187 543 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms