Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 RNU6-1266P-201ENST00000362794 105 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 RNU6-61P-201ENST00000365528 109 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CHRNA4P43681 SNORA22C-201ENST00000384614 134 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 U3.20-201ENST00000390909 217 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AC009804.1-201ENST00000400949 179 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AL034374.1-201ENST00000406329 351 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 RNU6-1156P-201ENST00000410365 100 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.36□□□□□ -1.55
CHRNA4P43681 RPLP0P7-201ENST00000416050 667 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.36□□□□□ -1.55
CHRNA4P43681 AC073069.1-201ENST00000428657 441 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AC010881.1-201ENST00000433830 235 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AC108059.3-201ENST00000456388 214 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 MTCO3P2-201ENST00000457365 171 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.36□□□□□ -1.55
CHRNA4P43681 AC108161.1-201ENST00000461060 402 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 TBCAP3-201ENST00000512475 312 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 MRPS36P4-201ENST00000534436 298 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.36□□□□□ -1.55
CHRNA4P43681 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.36□□□□□ -1.55
CHRNA4P43681 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHRNA4P43681 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA4P43681 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.36□□□□□ -1.55
CHRNA4P43681 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.36□□□□□ -1.55
CHRNA4P43681 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRNA4P43681 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 AL391684.1-202ENST00000641293 1636 ntBASIC5.36□□□□□ -1.55
CHRNA4P43681 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CHRNA4P43681 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRNA4P43681 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CHRNA4P43681 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CHRNA4P43681 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CHRNA4P43681 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA4P43681 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHRNA4P43681 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA4P43681 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 AC107021.2-201ENST00000567714 2095 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.35□□□□□ -1.55
CHRNA4P43681 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA4P43681 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA4P43681 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA4P43681 RNU6-28P-201ENST00000362378 107 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 RNU6-1317P-201ENST00000364582 104 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 RNU6-1207P-201ENST00000384343 107 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 RNU6-959P-201ENST00000384671 107 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 HSPA8P15-201ENST00000401676 786 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 OR3A2-201ENST00000408891 1076 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 RNA5SP487-201ENST00000410186 122 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 AC079809.1-201ENST00000415468 276 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AC234781.4-201ENST00000419384 244 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 MRPS21P2-201ENST00000424704 264 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AC097713.2-201ENST00000430199 356 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AL158071.1-201ENST00000430315 461 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA4P43681 FTH1P1-201ENST00000437933 532 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 RPL21P89-201ENST00000444021 467 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 HMGN3P1-201ENST00000453847 193 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 RNU7-27P-201ENST00000459281 62 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AP000893.1-201ENST00000474462 794 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 AC098869.1-201ENST00000481627 292 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 RPS23P5-201ENST00000495419 428 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AC104806.1-201ENST00000508720 308 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA4P43681 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA4P43681 AL049779.2-201ENST00000553847 315 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.35□□□□□ -1.55
CHRNA4P43681 SNORD39.2-201ENST00000579995 76 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 AC017100.2-201ENST00000584628 355 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 U2.17-201ENST00000611454 95 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 CYP4F35P-202ENST00000636121 390 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CHRNA4P43681 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA4P43681 AC005005.4-201ENST00000623789 16698 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA4P43681 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHRNA4P43681 AC009902.3-201ENST00000606235 2172 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CHRNA4P43681 BDP1P-201ENST00000582658 1990 ntBASIC5.35□□□□□ -1.55
CHRNA4P43681 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CHRNA4P43681 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CHRNA4P43681 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms