Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-777P-201ENST00000364265 104 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HOXD13P35453 MIR1290-201ENST00000408735 78 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD13P35453 AL158071.1-201ENST00000430315 461 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC073063.1-201ENST00000434352 607 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 RABEPKP1-201ENST00000440529 1026 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD13P35453 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXD13P35453 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD13P35453 RPL30P9-201ENST00000465586 330 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC108860.1-201ENST00000484521 383 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC021146.5-201ENST00000503544 545 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD13P35453 IGKV2-26-201ENST00000518305 343 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXD13P35453 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXD13P35453 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXD13P35453 AP005205.1-201ENST00000563503 508 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC055876.1-202ENST00000567053 138 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD13P35453 AL110115.1-201ENST00000614396 364 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC008121.2-201ENST00000614647 523 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC006133.1-201ENST00000617106 264 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC092628.2-201ENST00000622492 339 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC243312.2-201ENST00000623340 601 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXD13P35453 PCMTD1P7-201ENST00000634506 357 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC127502.3-201ENST00000636170 1206 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC244258.1-201ENST00000637553 1071 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AL392088.2-201ENST00000637607 285 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 AC032011.1-201ENST00000611703 1549 ntBASIC3.79□□□□□ -1.8
HOXD13P35453 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXD13P35453 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD13P35453 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXD13P35453 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 RNU6-853P-201ENST00000364306 107 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 MIR490-201ENST00000384865 128 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 PTMAP2-201ENST00000397627 327 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AL590084.2-201ENST00000401481 382 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 TPMTP3-201ENST00000411928 735 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 LSM1P1-201ENST00000438629 273 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 MTCYBP3-201ENST00000445588 1137 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 FTH1P2-201ENST00000466086 412 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD13P35453 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 AL359273.1-201ENST00000510918 627 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXD13P35453 OR7K1P-201ENST00000546439 926 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 CCNG2P1-201ENST00000549521 1000 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD13P35453 AC034268.2-201ENST00000571784 482 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 MIR3921-201ENST00000577308 85 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXD13P35453 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD13P35453 AC021171.1-201ENST00000603137 706 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AC106900.2-201ENST00000604994 317 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AL390240.1-201ENST00000612950 384 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AC009159.2-201ENST00000617603 606 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 AC009268.2-201ENST00000621925 457 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.78□□□□□ -1.8
HOXD13P35453 AL159972.1-201ENST00000625150 448 ntBASIC3.78□□□□□ -1.8
HOXD13P35453 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXD13P35453 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HOXD13P35453 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXD13P35453 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
HOXD13P35453 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.81
HOXD13P35453 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD13P35453 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD13P35453 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 AL513302.2-201ENST00000562313 1842 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AC092326.2-201ENST00000624772 1561 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AC007256.1-201ENST00000392253 2765 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD13P35453 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 AL391994.1-201ENST00000254724 282 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD13P35453 U3.20-201ENST00000390909 217 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 ATP5F1P3-201ENST00000397213 657 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 MTND1P21-201ENST00000412991 285 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXD13P35453 HMGB1P11-201ENST00000413899 637 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.77□□□□□ -1.81
HOXD13P35453 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXD13P35453 HMGN2P31-201ENST00000432430 273 ntBASIC3.77□□□□□ -1.81
HOXD13P35453 AC092641.1-201ENST00000440229 772 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms