Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CKS2P33552 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
CKS2P33552 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
CKS2P33552 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.65□□□□□ -2.14
CKS2P33552 CR848007.1-201ENST00000442354 1699 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AC022336.2-201ENST00000568966 2538 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.65□□□□□ -2.15
CKS2P33552 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
CKS2P33552 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.65□□□□□ -2.15
CKS2P33552 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS2P33552 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CKS2P33552 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
CKS2P33552 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.65□□□□□ -2.15
CKS2P33552 LINC01347-201ENST00000417964 355 ntBASIC1.65□□□□□ -2.15
CKS2P33552 COTL1P1-201ENST00000422309 375 ntBASIC1.65□□□□□ -2.15
CKS2P33552 FO393419.3-201ENST00000428741 282 ntBASIC1.65□□□□□ -2.15
CKS2P33552 FCF1P1-201ENST00000432690 571 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS2P33552 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.65□□□□□ -2.15
CKS2P33552 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.65□□□□□ -2.15
CKS2P33552 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS2P33552 AL135752.1-201ENST00000479477 471 ntBASIC1.65□□□□□ -2.15
CKS2P33552 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.65□□□□□ -2.15
CKS2P33552 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CKS2P33552 AC008427.1-201ENST00000503102 655 ntBASIC1.65□□□□□ -2.15
CKS2P33552 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS2P33552 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS2P33552 SAP18P1-201ENST00000512058 390 ntBASIC1.65□□□□□ -2.15
CKS2P33552 SNORA70.16-201ENST00000516390 95 ntBASIC1.65□□□□□ -2.15
CKS2P33552 RNA5SP24-201ENST00000516478 95 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.65□□□□□ -2.15
CKS2P33552 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.65□□□□□ -2.15
CKS2P33552 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.65□□□□□ -2.15
CKS2P33552 MIR4697-201ENST00000582977 78 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AC007619.2-201ENST00000605743 379 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.65□□□□□ -2.15
CKS2P33552 AC013562.2-201ENST00000611632 603 ntBASIC1.65□□□□□ -2.15
CKS2P33552 MIR6840-201ENST00000611937 71 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AC009090.3-201ENST00000616553 565 ntBASIC1.65□□□□□ -2.15
CKS2P33552 MIR6766-201ENST00000622641 72 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AC027309.3-201ENST00000623419 351 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AC034229.5-201ENST00000624258 185 ntBASIC1.65□□□□□ -2.15
CKS2P33552 AL160394.1-201ENST00000624765 724 ntBASIC1.65□□□□□ -2.15
CKS2P33552 U6.107-201ENST00000637108 79 ntBASIC1.65□□□□□ -2.15
CKS2P33552 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CKS2P33552 AC097714.1-201ENST00000511272 1647 ntBASIC1.65□□□□□ -2.15
CKS2P33552 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
CKS2P33552 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
CKS2P33552 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.65□□□□□ -2.15
CKS2P33552 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.65□□□□□ -2.15
CKS2P33552 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CKS2P33552 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
CKS2P33552 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CKS2P33552 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CKS2P33552 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.64□□□□□ -2.15
CKS2P33552 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
CKS2P33552 SNORA68.1-201ENST00000364537 132 ntBASIC1.64□□□□□ -2.15
CKS2P33552 MIR524-201ENST00000385242 87 ntBASIC1.64□□□□□ -2.15
CKS2P33552 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CKS2P33552 U3.20-201ENST00000390909 217 ntBASIC1.64□□□□□ -2.15
CKS2P33552 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CKS2P33552 CYCSP45-201ENST00000402289 315 ntBASIC1.64□□□□□ -2.15
CKS2P33552 MTCO1P39-201ENST00000426148 480 ntBASIC1.64□□□□□ -2.15
CKS2P33552 MTCO3P30-201ENST00000426425 670 ntBASIC1.64□□□□□ -2.15
CKS2P33552 SRIP2-201ENST00000428470 166 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.64□□□□□ -2.15
CKS2P33552 EZH2P1-201ENST00000431167 291 ntBASIC1.64□□□□□ -2.15
CKS2P33552 ARL4AP4-201ENST00000434170 518 ntBASIC1.64□□□□□ -2.15
CKS2P33552 MRPS33P4-201ENST00000434892 317 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.64□□□□□ -2.15
CKS2P33552 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CKS2P33552 AP000936.2-201ENST00000447151 681 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AL358232.1-201ENST00000448030 501 ntBASIC1.64□□□□□ -2.15
CKS2P33552 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.64□□□□□ -2.15
CKS2P33552 PNPLA4P1-201ENST00000458328 305 ntBASIC1.64□□□□□ -2.15
CKS2P33552 RNU6-717P-201ENST00000459076 104 ntBASIC1.64□□□□□ -2.15
CKS2P33552 HMGN1P8-201ENST00000463578 288 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.64□□□□□ -2.15
CKS2P33552 RNA5SP320-201ENST00000516263 124 ntBASIC1.64□□□□□ -2.15
CKS2P33552 RNA5SP364-201ENST00000516938 78 ntBASIC1.64□□□□□ -2.15
CKS2P33552 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.64□□□□□ -2.15
CKS2P33552 AC021269.2-201ENST00000532318 330 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.64□□□□□ -2.15
CKS2P33552 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.64□□□□□ -2.15
CKS2P33552 AC012669.1-201ENST00000603209 283 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AC008739.3-201ENST00000603262 127 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AL513477.2-201ENST00000607858 568 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AC093732.2-201ENST00000607950 274 ntBASIC1.64□□□□□ -2.15
CKS2P33552 AC084757.4-201ENST00000616350 526 ntBASIC1.64□□□□□ -2.15
CKS2P33552 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.64□□□□□ -2.15
CKS2P33552 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.64□□□□□ -2.15
CKS2P33552 AL356118.1-201ENST00000635272 1078 ntBASIC1.64□□□□□ -2.15
CKS2P33552 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.64□□□□□ -2.15
CKS2P33552 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CKS2P33552 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.64□□□□□ -2.15
CKS2P33552 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
CKS2P33552 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.64□□□□□ -2.15
CKS2P33552 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.63□□□□□ -2.15
CKS2P33552 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms