Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX1P22670 AC119751.6-201ENST00000416712 186 ntBASIC5.88□□□□□ -1.47
RFX1P22670 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.88□□□□□ -1.47
RFX1P22670 RPL30P15-201ENST00000457129 321 ntBASIC5.88□□□□□ -1.47
RFX1P22670 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RFX1P22670 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.88□□□□□ -1.47
RFX1P22670 SMURF2P1-201ENST00000514992 481 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX1P22670 AP000676.2-201ENST00000529711 301 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.88□□□□□ -1.47
RFX1P22670 MIR3691-201ENST00000578066 90 ntBASIC5.88□□□□□ -1.47
RFX1P22670 RN7SL356P-201ENST00000582228 248 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.88□□□□□ -1.47
RFX1P22670 MIR5692C1-201ENST00000585309 91 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.88□□□□□ -1.47
RFX1P22670 AC108738.1-201ENST00000603703 237 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX1P22670 FAM157A-202ENST00000615155 405 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AC133104.2-201ENST00000615272 193 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AC132068.1-201ENST00000623805 459 ntBASIC5.88□□□□□ -1.47
RFX1P22670 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
RFX1P22670 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.88□□□□□ -1.47
RFX1P22670 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 MTND5P16-201ENST00000460269 1703 ntBASIC5.88□□□□□ -1.47
RFX1P22670 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFX1P22670 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.87□□□□□ -1.47
RFX1P22670 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 Y_RNA.28-201ENST00000362554 111 ntBASIC5.87□□□□□ -1.47
RFX1P22670 Y_RNA.112-201ENST00000363250 102 ntBASIC5.87□□□□□ -1.47
RFX1P22670 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 MIR765-201ENST00000390226 114 ntBASIC5.87□□□□□ -1.47
RFX1P22670 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 RPL31P12-201ENST00000422587 358 ntBASIC5.87□□□□□ -1.47
RFX1P22670 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 AC090686.1-201ENST00000481577 749 ntBASIC5.87□□□□□ -1.47
RFX1P22670 RPS21P4-201ENST00000487122 248 ntBASIC5.87□□□□□ -1.47
RFX1P22670 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 TBCAP3-201ENST00000512475 312 ntBASIC5.87□□□□□ -1.47
RFX1P22670 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.87□□□□□ -1.47
RFX1P22670 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.87□□□□□ -1.47
RFX1P22670 AC022360.1-201ENST00000521058 340 ntBASIC5.87□□□□□ -1.47
RFX1P22670 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RFX1P22670 AC069061.3-201ENST00000582254 823 ntBASIC5.87□□□□□ -1.47
RFX1P22670 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 BDH2P1-201ENST00000602288 736 ntBASIC5.87□□□□□ -1.47
RFX1P22670 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.87□□□□□ -1.47
RFX1P22670 AC126915.2-201ENST00000610957 190 ntBASIC5.87□□□□□ -1.47
RFX1P22670 AL157817.1-201ENST00000614264 790 ntBASIC5.87□□□□□ -1.47
RFX1P22670 PRO1804-201ENST00000623780 2050 ntBASIC5.87□□□□□ -1.47
RFX1P22670 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
RFX1P22670 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.87□□□□□ -1.47
RFX1P22670 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RFX1P22670 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.87□□□□□ -1.47
RFX1P22670 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RFX1P22670 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RFX1P22670 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 AL365440.1-201ENST00000436135 2167 ntBASIC5.86□□□□□ -1.47
RFX1P22670 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 RNU6-562P-201ENST00000362731 107 ntBASIC5.86□□□□□ -1.47
RFX1P22670 Y_RNA.144-201ENST00000363521 113 ntBASIC5.86□□□□□ -1.47
RFX1P22670 RNA5SP234-201ENST00000363916 119 ntBASIC5.86□□□□□ -1.47
RFX1P22670 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFX1P22670 RNU6-601P-201ENST00000384540 107 ntBASIC5.86□□□□□ -1.47
RFX1P22670 RNU6-328P-201ENST00000390887 106 ntBASIC5.86□□□□□ -1.47
RFX1P22670 RNU6-308P-201ENST00000390957 107 ntBASIC5.86□□□□□ -1.47
RFX1P22670 AL391417.1-201ENST00000404100 426 ntBASIC5.86□□□□□ -1.47
RFX1P22670 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
RFX1P22670 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.86□□□□□ -1.47
RFX1P22670 AC080125.1-201ENST00000414888 684 ntBASIC5.86□□□□□ -1.47
RFX1P22670 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.86□□□□□ -1.47
RFX1P22670 PDSS1P1-201ENST00000422953 1114 ntBASIC5.86□□□□□ -1.47
RFX1P22670 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.86□□□□□ -1.47
RFX1P22670 AC090804.1-201ENST00000448870 490 ntBASIC5.86□□□□□ -1.47
RFX1P22670 MTCO3P10-201ENST00000455912 772 ntBASIC5.86□□□□□ -1.47
RFX1P22670 RPL37P6-201ENST00000460682 294 ntBASIC5.86□□□□□ -1.47
RFX1P22670 AC108161.1-201ENST00000461060 402 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms