Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.09□□□□□ -1.91
XRCC1P18887 MTND4LP10-201ENST00000435146 291 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 MTND4P6-201ENST00000438297 472 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.09□□□□□ -1.91
XRCC1P18887 EEF1A1P39-201ENST00000440791 250 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 HSPE1P28-201ENST00000443139 211 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.09□□□□□ -1.91
XRCC1P18887 AL671855.1-201ENST00000446875 1203 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 EXOSC3P1-201ENST00000448649 500 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 HMGB1P15-201ENST00000453854 435 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
XRCC1P18887 AC104308.1-201ENST00000454621 333 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AP001992.1-205ENST00000462248 379 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RPL27AP5-201ENST00000469428 449 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RPS15AP17-201ENST00000470598 390 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AC006445.1-201ENST00000491925 405 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.09□□□□□ -1.91
XRCC1P18887 AC114322.1-201ENST00000506771 926 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 HMGB1P28-201ENST00000507778 552 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.09□□□□□ -1.91
XRCC1P18887 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.09□□□□□ -1.91
XRCC1P18887 AC004062.1-201ENST00000509926 645 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 RNA5SP468-201ENST00000516782 93 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AC104986.1-201ENST00000517978 436 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.09□□□□□ -1.91
XRCC1P18887 SLC2A13P1-201ENST00000531560 322 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.09□□□□□ -1.91
XRCC1P18887 AL132657.2-201ENST00000564417 358 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.09□□□□□ -1.91
XRCC1P18887 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.09□□□□□ -1.91
XRCC1P18887 uc_338.25-201ENST00000613756 156 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.09□□□□□ -1.91
XRCC1P18887 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
XRCC1P18887 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.09□□□□□ -1.91
XRCC1P18887 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
XRCC1P18887 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.09□□□□□ -1.92
XRCC1P18887 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
XRCC1P18887 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
XRCC1P18887 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
XRCC1P18887 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
XRCC1P18887 MIR23A-201ENST00000385245 73 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 SNORA48.2-201ENST00000390926 124 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 SNORA48.5-201ENST00000391143 135 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 RNA5SP129-201ENST00000410276 118 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AC106883.1-201ENST00000418805 562 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.08□□□□□ -1.92
XRCC1P18887 EZH2P1-201ENST00000431167 291 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 NANOGP2-201ENST00000435391 727 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 HIGD1AP11-201ENST00000438361 280 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.08□□□□□ -1.92
XRCC1P18887 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
XRCC1P18887 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.08□□□□□ -1.92
XRCC1P18887 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.08□□□□□ -1.92
XRCC1P18887 RPL21P8-201ENST00000465083 535 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AC090453.1-201ENST00000495560 436 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 PSMA2P1-201ENST00000526365 646 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.08□□□□□ -1.92
XRCC1P18887 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.08□□□□□ -1.92
XRCC1P18887 AC126177.3-201ENST00000551839 688 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.08□□□□□ -1.92
XRCC1P18887 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.08□□□□□ -1.92
XRCC1P18887 AC015688.2-201ENST00000584523 262 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 RPP40P2-201ENST00000603596 712 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AL160237.3-201ENST00000604114 1013 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AL160281.1-201ENST00000605307 311 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AL590240.3-201ENST00000621416 943 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AL360181.4-201ENST00000621752 134 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AC010608.3-201ENST00000625048 527 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.08□□□□□ -1.92
XRCC1P18887 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 AC097714.1-201ENST00000511272 1647 ntBASIC3.08□□□□□ -1.92
XRCC1P18887 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
XRCC1P18887 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
XRCC1P18887 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
XRCC1P18887 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
XRCC1P18887 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.07□□□□□ -1.92
XRCC1P18887 SNORD15B-201ENST00000384714 146 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.07□□□□□ -1.92
XRCC1P18887 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.07□□□□□ -1.92
XRCC1P18887 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 RPL7P46-201ENST00000425129 740 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 DUTP6-201ENST00000425573 462 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AC091390.3-201ENST00000426478 338 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.07□□□□□ -1.92
XRCC1P18887 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.07□□□□□ -1.92
XRCC1P18887 OR10R1P-201ENST00000441524 1141 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 ZNF886P-201ENST00000450781 723 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.07□□□□□ -1.92
XRCC1P18887 S100A11P2-201ENST00000467589 312 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.07□□□□□ -1.92
XRCC1P18887 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
XRCC1P18887 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.07□□□□□ -1.92
XRCC1P18887 RNU6-1095P-201ENST00000516148 108 ntBASIC3.07□□□□□ -1.92
XRCC1P18887 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.07□□□□□ -1.92
XRCC1P18887 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.07□□□□□ -1.92
XRCC1P18887 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms