Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.61□□□□□ -1.99
COL1A2P08123 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL1A2P08123 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL1A2P08123 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.61□□□□□ -1.99
COL1A2P08123 MIR4509-3-201ENST00000578671 94 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 MIR5007-201ENST00000583098 95 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 MIR4509-2-201ENST00000583920 94 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC061975.8-201ENST00000587058 721 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.61□□□□□ -1.99
COL1A2P08123 AL022067.1-201ENST00000602426 454 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 MIR4509-1-201ENST00000618224 94 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
COL1A2P08123 AC006927.4-201ENST00000639187 543 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.61□□□□□ -1.99
COL1A2P08123 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL1A2P08123 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC007256.1-201ENST00000392253 2765 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
COL1A2P08123 ZNF29P-201ENST00000225587 168 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL1A2P08123 SNORD114-30-201ENST00000364448 72 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 RNU6-532P-201ENST00000384318 107 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 UBE2V1P9-201ENST00000414760 368 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 RPL7P46-201ENST00000425129 740 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.61□□□□□ -1.99
COL1A2P08123 TOMM20P4-201ENST00000427861 435 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC098826.1-201ENST00000433943 471 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.61□□□□□ -1.99
COL1A2P08123 UBE2D3P1-201ENST00000436669 444 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 AL096803.2-201ENST00000450032 677 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 snoU13.26-201ENST00000459452 105 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.61□□□□□ -1.99
COL1A2P08123 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.61□□□□□ -1.99
COL1A2P08123 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 RNU6-276P-201ENST00000516114 96 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 RNA5SP281-201ENST00000516504 135 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 EEF1A1P37-201ENST00000522748 715 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 AP003717.3-201ENST00000544832 1180 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AL049870.4-201ENST00000555741 486 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.61□□□□□ -1.99
COL1A2P08123 AC010735.1-201ENST00000567305 1026 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AGGF1P5-201ENST00000567900 919 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.61□□□□□ -1.99
COL1A2P08123 AP002802.2-201ENST00000605877 235 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AL359198.2-201ENST00000611836 194 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 MIR7111-201ENST00000619751 72 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AP000770.2-201ENST00000623694 100 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.61□□□□□ -1.99
COL1A2P08123 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
COL1A2P08123 AC132825.7-201ENST00000638744 335 ntBASIC2.61□□□□□ -1.99
COL1A2P08123 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.61□□□□□ -1.99
COL1A2P08123 AL118496.1-201ENST00000440201 1812 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL1A2P08123 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
COL1A2P08123 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL1A2P08123 AL139811.1-201ENST00000424779 2299 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.6□□□□□ -1.99
COL1A2P08123 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL1A2P08123 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL1A2P08123 U8.2-201ENST00000363156 134 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 SNORA25.6-201ENST00000364121 118 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL1A2P08123 MTND4P13-201ENST00000402078 1023 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 HSPE1P26-201ENST00000405341 275 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AL034374.1-201ENST00000406329 351 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 LINC01347-201ENST00000417964 355 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.6□□□□□ -1.99
COL1A2P08123 AC093422.3-201ENST00000428506 305 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 ARF4P4-201ENST00000439608 520 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 HMGB3P21-201ENST00000452483 547 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.6□□□□□ -1.99
COL1A2P08123 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.6□□□□□ -1.99
COL1A2P08123 AC091163.3-201ENST00000518269 1144 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AC010376.1-201ENST00000522101 334 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.6□□□□□ -1.99
COL1A2P08123 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.6□□□□□ -1.99
COL1A2P08123 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.6□□□□□ -1.99
COL1A2P08123 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC2.6□□□□□ -1.99
COL1A2P08123 MIR1273D-201ENST00000577266 86 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 MIR4789-201ENST00000577469 82 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AC112220.2-201ENST00000605513 533 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AL157392.4-201ENST00000609756 345 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.6□□□□□ -1.99
COL1A2P08123 AC097520.1-201ENST00000624435 385 ntBASIC2.6□□□□□ -1.99
COL1A2P08123 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
COL1A2P08123 AC092881.1-201ENST00000638218 2733 ntBASIC2.59□□□□□ -1.99
COL1A2P08123 RNU5B-1-201ENST00000363286 116 ntBASIC2.59□□□□□ -2
COL1A2P08123 Y_RNA.238-201ENST00000364441 102 ntBASIC2.59□□□□□ -2
COL1A2P08123 U6.112-201ENST00000384129 70 ntBASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms