Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RMST_8.1-201ENST00000610287 165 ntBASIC3.44□□□□□ -1.86
SIX3O95343 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.44□□□□□ -1.86
SIX3O95343 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX3O95343 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIX3O95343 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SIX3O95343 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX3O95343 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX3O95343 AC091152.2-201ENST00000591628 2569 ntBASIC3.44□□□□□ -1.86
SIX3O95343 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SIX3O95343 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.44□□□□□ -1.86
SIX3O95343 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
SIX3O95343 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SIX3O95343 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SIX3O95343 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX3O95343 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX3O95343 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SIX3O95343 DEFB108F-201ENST00000344638 222 ntBASIC3.43□□□□□ -1.86
SIX3O95343 RNU5A-1-201ENST00000362698 116 ntBASIC3.43□□□□□ -1.86
SIX3O95343 RNU6-1078P-201ENST00000364522 103 ntBASIC3.43□□□□□ -1.86
SIX3O95343 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX3O95343 RPL27AP8-201ENST00000424277 446 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX3O95343 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX3O95343 AC092754.2-201ENST00000463506 460 ntBASIC3.43□□□□□ -1.86
SIX3O95343 RN7SL594P-201ENST00000470590 287 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX3O95343 AP000563.1-201ENST00000490865 758 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX3O95343 AC006499.5-201ENST00000505037 514 ntBASIC3.43□□□□□ -1.86
SIX3O95343 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX3O95343 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX3O95343 AP000926.4-201ENST00000527351 454 ntBASIC3.43□□□□□ -1.86
SIX3O95343 DEFB108D-201ENST00000527787 222 ntBASIC3.43□□□□□ -1.86
SIX3O95343 MTCO2P15-201ENST00000532655 656 ntBASIC3.43□□□□□ -1.86
SIX3O95343 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX3O95343 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX3O95343 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX3O95343 AL163153.1-201ENST00000554223 283 ntBASIC3.43□□□□□ -1.86
SIX3O95343 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX3O95343 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.43□□□□□ -1.86
SIX3O95343 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.43□□□□□ -1.86
SIX3O95343 AP001429.1-201ENST00000602568 530 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AL109653.1-201ENST00000603091 248 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AL357094.1-201ENST00000603845 844 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AC107294.1-201ENST00000609524 467 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AC006111.3-201ENST00000622137 383 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AP003355.3-201ENST00000623465 114 ntBASIC3.43□□□□□ -1.86
SIX3O95343 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.43□□□□□ -1.86
SIX3O95343 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.43□□□□□ -1.86
SIX3O95343 AC002546.1-201ENST00000588041 2504 ntBASIC3.43□□□□□ -1.86
SIX3O95343 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
SIX3O95343 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SIX3O95343 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SIX3O95343 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX3O95343 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX3O95343 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX3O95343 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SIX3O95343 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SIX3O95343 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX3O95343 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SIX3O95343 AP002088.1-201ENST00000382740 395 ntBASIC3.42□□□□□ -1.86
SIX3O95343 RNU6-157P-201ENST00000383957 107 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL122016.1-201ENST00000403365 367 ntBASIC3.42□□□□□ -1.86
SIX3O95343 RPS3AP24-201ENST00000407896 734 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX3O95343 MTCO2P21-201ENST00000419780 677 ntBASIC3.42□□□□□ -1.86
SIX3O95343 BX119904.4-201ENST00000424402 301 ntBASIC3.42□□□□□ -1.86
SIX3O95343 RPL7L1P10-201ENST00000427790 463 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX3O95343 UBE2V1P13-201ENST00000436983 439 ntBASIC3.42□□□□□ -1.86
SIX3O95343 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SIX3O95343 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX3O95343 AL357552.1-201ENST00000445254 415 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX3O95343 RSL24D1P3-201ENST00000449255 495 ntBASIC3.42□□□□□ -1.86
SIX3O95343 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX3O95343 MTND2P24-201ENST00000453434 806 ntBASIC3.42□□□□□ -1.86
SIX3O95343 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX3O95343 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX3O95343 RPL30P9-201ENST00000465586 330 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL049714.1-201ENST00000466686 347 ntBASIC3.42□□□□□ -1.86
SIX3O95343 RPL7P23-201ENST00000493874 747 ntBASIC3.42□□□□□ -1.86
SIX3O95343 RPL7P47-201ENST00000497299 556 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AC020893.1-201ENST00000502452 580 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AC104090.1-201ENST00000506341 1171 ntBASIC3.42□□□□□ -1.86
SIX3O95343 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SIX3O95343 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.42□□□□□ -1.86
SIX3O95343 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.42□□□□□ -1.86
SIX3O95343 AC026403.1-201ENST00000518938 295 ntBASIC3.42□□□□□ -1.86
SIX3O95343 HMGN1P28-201ENST00000521340 364 ntBASIC3.42□□□□□ -1.86
SIX3O95343 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.42□□□□□ -1.86
SIX3O95343 FAM60DP-201ENST00000524174 632 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AC125611.2-201ENST00000551907 647 ntBASIC3.42□□□□□ -1.86
SIX3O95343 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
SIX3O95343 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX3O95343 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.42□□□□□ -1.86
SIX3O95343 AC234772.3-201ENST00000602277 528 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL133507.1-201ENST00000605269 557 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AC092106.3-201ENST00000611308 722 ntBASIC3.42□□□□□ -1.86
SIX3O95343 AL592295.2-201ENST00000612578 206 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms