Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNA5SP372-201ENST00000390836 115 ntBASIC5.37□□□□□ -1.55
SOX1O00570 RN7SKP202-201ENST00000410439 330 ntBASIC5.37□□□□□ -1.55
SOX1O00570 RNA5SP107-201ENST00000411358 122 ntBASIC5.37□□□□□ -1.55
SOX1O00570 CRYBB2P1-203ENST00000415709 538 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX1O00570 CALM2P2-201ENST00000428512 440 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AC092162.1-201ENST00000432828 434 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX1O00570 AL354714.3-201ENST00000447284 493 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AL583843.1-201ENST00000456070 346 ntBASIC5.37□□□□□ -1.55
SOX1O00570 RPL21P8-201ENST00000465083 535 ntBASIC5.37□□□□□ -1.55
SOX1O00570 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.37□□□□□ -1.55
SOX1O00570 RN7SL132P-201ENST00000478131 296 ntBASIC5.37□□□□□ -1.55
SOX1O00570 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.37□□□□□ -1.55
SOX1O00570 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX1O00570 RNU6-635P-201ENST00000516651 102 ntBASIC5.37□□□□□ -1.55
SOX1O00570 MRPL49P2-201ENST00000521066 465 ntBASIC5.37□□□□□ -1.55
SOX1O00570 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.37□□□□□ -1.55
SOX1O00570 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.37□□□□□ -1.55
SOX1O00570 MIR3124-201ENST00000582636 67 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX1O00570 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX1O00570 NF1P5-201ENST00000588287 448 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AL354984.3-201ENST00000604803 325 ntBASIC5.37□□□□□ -1.55
SOX1O00570 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.37□□□□□ -1.55
SOX1O00570 DUSP12P1-201ENST00000612874 516 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AC123768.4-201ENST00000616244 701 ntBASIC5.37□□□□□ -1.55
SOX1O00570 ATP5A1P2-202ENST00000616464 443 ntBASIC5.37□□□□□ -1.55
SOX1O00570 AC092608.2-201ENST00000624427 218 ntBASIC5.37□□□□□ -1.55
SOX1O00570 ZNF734P-201ENST00000419494 1534 ntBASIC5.37□□□□□ -1.55
SOX1O00570 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 AC103710.2-202ENST00000641454 2853 ntBASIC5.37□□□□□ -1.55
SOX1O00570 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.37□□□□□ -1.55
SOX1O00570 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SOX1O00570 Z95327.2-201ENST00000414579 1873 ntBASIC5.37□□□□□ -1.55
SOX1O00570 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 OR56B2P-202ENST00000641377 2453 ntBASIC5.36□□□□□ -1.55
SOX1O00570 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 AC004656.1-201ENST00000568479 4951 ntBASIC5.36□□□□□ -1.55
SOX1O00570 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SOX1O00570 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX1O00570 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 RNU6-562P-201ENST00000362731 107 ntBASIC5.36□□□□□ -1.55
SOX1O00570 RNU6-1078P-201ENST00000364522 103 ntBASIC5.36□□□□□ -1.55
SOX1O00570 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 RNU1-13P-201ENST00000384499 162 ntBASIC5.36□□□□□ -1.55
SOX1O00570 RNA5SP219-201ENST00000390940 113 ntBASIC5.36□□□□□ -1.55
SOX1O00570 RNU6-550P-201ENST00000391057 101 ntBASIC5.36□□□□□ -1.55
SOX1O00570 RPL30P2-201ENST00000414021 291 ntBASIC5.36□□□□□ -1.55
SOX1O00570 AL139095.3-201ENST00000419672 1203 ntBASIC5.36□□□□□ -1.55
SOX1O00570 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX1O00570 RPL35AP22-201ENST00000436855 335 ntBASIC5.36□□□□□ -1.55
SOX1O00570 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX1O00570 REG1CP-206ENST00000447469 496 ntBASIC5.36□□□□□ -1.55
SOX1O00570 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX1O00570 SNORA59A-201ENST00000459326 152 ntBASIC5.36□□□□□ -1.55
SOX1O00570 RPL23AP56-201ENST00000460778 453 ntBASIC5.36□□□□□ -1.55
SOX1O00570 FTH1P24-201ENST00000503502 462 ntBASIC5.36□□□□□ -1.55
SOX1O00570 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.36□□□□□ -1.55
SOX1O00570 RNU6-1092P-201ENST00000516955 87 ntBASIC5.36□□□□□ -1.55
SOX1O00570 AC022360.1-201ENST00000521058 340 ntBASIC5.36□□□□□ -1.55
SOX1O00570 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX1O00570 AC122688.1-201ENST00000541494 223 ntBASIC5.36□□□□□ -1.55
SOX1O00570 SULT1C2P2-201ENST00000562517 294 ntBASIC5.36□□□□□ -1.55
SOX1O00570 MIR3944-201ENST00000581277 108 ntBASIC5.36□□□□□ -1.55
SOX1O00570 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX1O00570 AL133481.2-203ENST00000607558 139 ntBASIC5.36□□□□□ -1.55
SOX1O00570 AC023813.4-201ENST00000607580 580 ntBASIC5.36□□□□□ -1.55
SOX1O00570 MIR6128-201ENST00000615528 109 ntBASIC5.36□□□□□ -1.55
SOX1O00570 HMGB1P24-202ENST00000615653 685 ntBASIC5.36□□□□□ -1.55
SOX1O00570 TTC41P-205ENST00000551270 3963 ntBASIC5.36□□□□□ -1.55
SOX1O00570 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX1O00570 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SOX1O00570 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX1O00570 BCORP1-203ENST00000513194 5093 ntBASIC5.35□□□□□ -1.55
SOX1O00570 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX1O00570 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX1O00570 AC104964.3-201ENST00000606115 2860 ntBASIC5.35□□□□□ -1.55
SOX1O00570 AC010329.2-201ENST00000595195 2737 ntBASIC5.35□□□□□ -1.55
SOX1O00570 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SOX1O00570 ZNF33CP-201ENST00000432492 2030 ntBASIC5.35□□□□□ -1.55
SOX1O00570 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
SOX1O00570 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX1O00570 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SOX1O00570 SAMMSON-210ENST00000641260 1308 ntBASIC5.35□□□□□ -1.55
SOX1O00570 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX1O00570 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SOX1O00570 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX1O00570 RNU1-136P-201ENST00000384181 164 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms