Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC188H7C350 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC188H7C350 AC017037.2-201ENST00000513850 890 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 RNU6-528P-201ENST00000516926 100 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 EEF1A1P37-201ENST00000522748 715 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC188H7C350 MED28P6-201ENST00000558776 231 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 AC009097.3-201ENST00000563557 1018 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC188H7C350 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC188H7C350 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 AL356321.1-201ENST00000621360 228 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC188H7C350 AC007490.1-201ENST00000624321 703 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 U6.98-201ENST00000637157 84 ntBASIC3.49□□□□□ -1.85
CCDC188H7C350 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC188H7C350 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC188H7C350 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC188H7C350 AC011477.1-204ENST00000623416 1325 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 RNU6-744P-201ENST00000365557 107 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 RNU6-1316P-201ENST00000384242 108 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 AL591034.1-201ENST00000407447 340 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC188H7C350 BX119904.4-201ENST00000424402 301 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 OR4K11P-201ENST00000431829 904 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC188H7C350 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC188H7C350 HMGN1P11-201ENST00000508668 303 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCDC188H7C350 OR8R1P-201ENST00000543943 764 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC188H7C350 MIR5685-201ENST00000579080 79 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 AC010591.1-201ENST00000603941 649 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 AC093424.1-201ENST00000604999 338 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 AL158211.4-201ENST00000606988 584 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 MIR92B-201ENST00000607575 96 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 AL356596.1-201ENST00000624230 379 ntBASIC3.48□□□□□ -1.85
CCDC188H7C350 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC188H7C350 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC188H7C350 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC188H7C350 AL356274.2-201ENST00000624379 3752 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC188H7C350 Y_RNA.18-201ENST00000362461 102 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNU6-462P-201ENST00000362659 105 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNU6-931P-201ENST00000363850 107 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNU6-777P-201ENST00000364265 104 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNU6-853P-201ENST00000364306 107 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNU4-28P-201ENST00000364739 141 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 U8.11-201ENST00000384699 133 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 U8.12-201ENST00000384701 133 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RPS3AP24-201ENST00000407896 734 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNA5SP44-201ENST00000410446 133 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC188H7C350 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC188H7C350 RPL36AP36-201ENST00000418616 301 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC010099.3-201ENST00000423896 409 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 OR2AS1P-201ENST00000427827 319 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC188H7C350 CYCSP4-201ENST00000429682 331 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AC104978.1-201ENST00000449387 391 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC115115.1-201ENST00000449927 248 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 U8.18-201ENST00000459285 133 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 HMGB1P36-201ENST00000487709 576 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC188H7C350 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AC034159.1-201ENST00000513885 583 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNA5SP380-201ENST00000517190 98 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC188H7C350 UBTFL10-201ENST00000528532 562 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AP003461.1-201ENST00000528866 78 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC188H7C350 HSPE1P5-201ENST00000561489 272 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AC055876.1-202ENST00000567053 138 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AC015917.1-201ENST00000579654 510 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC087683.2-201ENST00000611384 326 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AL139418.1-201ENST00000613613 177 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 TAB3P1-202ENST00000452645 1634 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC188H7C350 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC188H7C350 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC188H7C350 MTND5P27-201ENST00000428871 1720 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 AC087359.1-201ENST00000508335 1740 ntBASIC3.47□□□□□ -1.85
CCDC188H7C350 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC188H7C350 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC188H7C350 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CCDC188H7C350 AC005832.2-201ENST00000538921 1430 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms