Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RAC1P8-201ENST00000427086 527 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 GTF2IP7-202ENST00000436677 309 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 HIGD1AP11-201ENST00000438361 280 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL031313.1-201ENST00000448435 256 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 NPM1P13-201ENST00000452663 865 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 HMGN2P16-201ENST00000456802 261 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 snoU13.7-201ENST00000459220 104 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 RN7SL20P-201ENST00000488827 297 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC010460.2-201ENST00000509054 677 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 HMGB1P1-201ENST00000522557 636 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 OR6C73P-201ENST00000546432 358 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 SYF2P1-201ENST00000550658 413 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 MIR4319-201ENST00000577285 85 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 MIR4509-3-201ENST00000578671 94 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 MIR4435-1-201ENST00000582552 80 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 MIR4509-2-201ENST00000583920 94 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL390838.2-201ENST00000602394 274 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC024153.1-201ENST00000603103 365 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL133393.1-201ENST00000603277 287 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 RPL23AP92-201ENST00000603609 255 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 ATP1B3P1-201ENST00000605365 821 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC106052.1-201ENST00000608029 497 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 MIR4509-1-201ENST00000618224 94 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC091046.2-201ENST00000620775 665 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL157770.1-201ENST00000623049 439 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL136360.1-201ENST00000503377 1900 ntBASIC2.81□□□□□ -1.96
TMX2-CTNND1H3BSU7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RNU6-582P-201ENST00000362989 107 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RNU6-839P-201ENST00000363347 108 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RNU6-1242P-201ENST00000391052 103 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RPS3AP26-201ENST00000398259 784 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RPL36P19-201ENST00000430744 301 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 GSTA11P-201ENST00000452866 669 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RN7SL432P-201ENST00000484057 298 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC016065.2-201ENST00000514530 444 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RNU6-885P-201ENST00000516607 104 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 RNA5SP135-201ENST00000517019 125 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 OR10V3P-201ENST00000525712 725 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL445435.1-201ENST00000604232 665 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AP000787.2-201ENST00000604432 568 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL035413.2-201ENST00000604801 525 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC009974.1-201ENST00000608881 455 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 PART1_2.1-201ENST00000612397 250 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC073348.1-201ENST00000623002 331 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC108206.1-201ENST00000570186 4159 ntBASIC2.8□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC092447.7-201ENST00000422212 1621 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 MTND5P31-201ENST00000419366 1374 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC062016.1-201ENST00000355719 319 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 SNORA72.3-201ENST00000365074 132 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 Y_RNA.408-201ENST00000383987 102 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 RNU6-224P-201ENST00000384055 107 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 RPL31P1-201ENST00000398116 372 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 RPS4XP8-201ENST00000402039 771 ntBASIC2.79□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL139098.1-201ENST00000407291 389 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms