Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC090897.2-201ENST00000581715 130 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AP004372.1-201ENST00000604842 844 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AC022031.1-201ENST00000585985 2593 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 AL136520.1-201ENST00000600311 1322 ntBASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
CPSF4LA6NMK7 SNORD114-1-201ENST00000362705 72 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 RNU6-225P-201ENST00000384613 103 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 OR51A3P-201ENST00000413596 924 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 NPM1P11-201ENST00000417106 855 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC093084.1-201ENST00000424233 687 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 RPL7P54-201ENST00000438336 674 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 RPL17P49-201ENST00000443728 411 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AL353898.1-201ENST00000444055 238 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC011753.1-201ENST00000451001 220 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC104564.1-201ENST00000493028 407 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC034222.1-201ENST00000494052 532 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 RPL23AP55-201ENST00000498163 452 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 HMGB3P3-201ENST00000510526 400 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 HSPE1P14-201ENST00000605812 302 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC024560.3-201ENST00000608482 349 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AL390240.1-201ENST00000612950 384 ntBASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
CPSF4LA6NMK7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AL160175.1-201ENST00000428124 247 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 MTCO3P21-201ENST00000430791 643 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC233279.1-201ENST00000455300 423 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 SNORA59A-201ENST00000459326 152 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC104472.2-201ENST00000469035 601 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 UBL5P3-201ENST00000475112 231 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC109471.1-201ENST00000511631 612 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC006499.2-201ENST00000513470 337 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AK6P1-201ENST00000540219 478 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC124283.4-201ENST00000581815 456 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 VN1R78P-201ENST00000597393 564 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC016542.2-201ENST00000624201 619 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 AC024023.1-201ENST00000624530 922 ntBASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CPSF4LA6NMK7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 MCTS2P-201ENST00000394552 546 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 RNU6-1140P-201ENST00000410517 106 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC048351.1-201ENST00000420064 602 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 RPL21P112-201ENST00000434403 463 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AL136380.1-201ENST00000447970 162 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 TRBV1-201ENST00000476502 284 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 NCOR1P1-202ENST00000486162 291 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC093281.2-201ENST00000510153 597 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 HMGB1P1-201ENST00000522557 636 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC084851.1-201ENST00000529105 249 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 FAM106CP-201ENST00000582212 507 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 SNORD84-203ENST00000584275 78 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC112503.1-201ENST00000608436 391 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC006249.1-201ENST00000621223 471 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 AC079597.1-201ENST00000624306 508 ntBASIC1.51□□□□□ -2.17
CPSF4LA6NMK7 MTND4P23-201ENST00000447723 1363 ntBASIC1.5□□□□□ -2.17
CPSF4LA6NMK7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CPSF4LA6NMK7 Z98749.2-208ENST00000381646 500 ntBASIC1.5□□□□□ -2.17
CPSF4LA6NMK7 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
CPSF4LA6NMK7 AC241520.1-201ENST00000422654 1099 ntBASIC1.5□□□□□ -2.17
CPSF4LA6NMK7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.5□□□□□ -2.17
CPSF4LA6NMK7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms