Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RPS3AP50-201ENST00000487064 803 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 HSPD1P15-201ENST00000505573 1122 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC008958.1-201ENST00000511047 682 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 SNORA40.12-201ENST00000516329 111 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 RNU6-358P-201ENST00000516564 75 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 RNU6-835P-201ENST00000516974 104 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 RNU6-64P-201ENST00000517119 105 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC026403.1-201ENST00000518938 295 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC093249.4-201ENST00000564755 259 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 SLC25A36P1-201ENST00000590111 465 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AL139124.1-201ENST00000609123 421 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AP003122.6-201ENST00000623831 495 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AC019226.1-201ENST00000625666 515 ntBASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC85CA6NKD9 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 ZNF680P1-201ENST00000436625 1469 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 RNU6-39P-201ENST00000384344 107 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 SNORA48.2-201ENST00000390926 124 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC108032.1-201ENST00000416706 207 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 MRPL50P2-201ENST00000416821 482 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 RPL23AP30-201ENST00000432419 501 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 RPL7P54-201ENST00000438336 674 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 HMGB3P12-201ENST00000438745 556 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 DDX3P2-201ENST00000446138 111 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 BX842559.2-201ENST00000451418 605 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC234775.1-201ENST00000454247 670 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AL356010.1-201ENST00000456364 102 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 SNORD108-201ENST00000459332 71 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 MTND1P35-201ENST00000526739 508 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 OR4K8P-201ENST00000578842 1048 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 uc_338.13-201ENST00000618243 179 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 AC006065.6-201ENST00000625201 545 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 THAP12P5-201ENST00000405864 2275 ntBASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC85CA6NKD9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC007390.2-201ENST00000606229 3803 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 MIR133A2-201ENST00000347538 102 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 RNU4-44P-201ENST00000363050 141 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 RNU5E-8P-201ENST00000363502 116 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 ZNF90P2-204ENST00000419323 1075 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AL109913.1-201ENST00000421173 514 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AL139413.1-201ENST00000421309 217 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 OR2AS1P-201ENST00000427827 319 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 RPS20P5-201ENST00000434808 360 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 NDUFB4P8-201ENST00000435351 367 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 RPL7P28-201ENST00000437739 740 ntBASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC85CA6NKD9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms