Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RPS17P8-201ENST00000434525 335 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC010285.1-201ENST00000470580 392 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC126389.1-201ENST00000477436 290 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC078817.1-201ENST00000492623 435 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC015795.1-201ENST00000513669 327 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RN7SKP21-201ENST00000516503 220 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RPS3AP4-201ENST00000555161 764 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 RPL23AP84-201ENST00000571193 464 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 MIR4293-201ENST00000584305 78 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AL162413.1-201ENST00000603198 110 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC007621.1-201ENST00000604544 437 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC004067.1-201ENST00000608733 700 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC130324.3-201ENST00000614165 542 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 MAPK10-286ENST00000641208 8747 ntBASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA9Q9Y5G4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AP000542.2-201ENST00000623199 6179 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AP001350.1-201ENST00000601906 1524 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 Y_RNA.409-201ENST00000383990 98 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC110754.1-201ENST00000399740 601 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AL592291.1-201ENST00000403830 352 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RNU2-39P-201ENST00000410604 198 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RPL17P36-201ENST00000420302 549 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 MTCO1P20-201ENST00000425366 358 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RPEP3-201ENST00000425462 676 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 DUTP6-201ENST00000425573 462 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 ELOCP14-201ENST00000428070 331 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 ELOCP7-201ENST00000439968 331 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 MTCO3P18-201ENST00000440206 761 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RBMX2P4-201ENST00000441256 376 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 NUTF2P7-201ENST00000453086 375 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AL356010.1-201ENST00000456364 102 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RNU6-261P-201ENST00000459506 102 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RN7SL432P-201ENST00000484057 298 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RN7SL558P-201ENST00000497468 299 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC091868.1-201ENST00000508746 304 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC117522.1-201ENST00000509821 380 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RNA5SP497-201ENST00000516081 97 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 HMGB1P41-201ENST00000520234 440 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 OR4H12P-201ENST00000556269 907 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 NCAPGP2-201ENST00000557911 754 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC084783.1-201ENST00000565846 910 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 FAM60BP-201ENST00000578364 658 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 NRBF2P5-201ENST00000603087 788 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC025449.1-201ENST00000603896 529 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC012443.1-201ENST00000605605 231 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC002553.4-201ENST00000616896 331 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 U6.42-201ENST00000618440 107 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AL022401.1-201ENST00000619498 108 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AL360181.4-201ENST00000621752 134 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC110801.1-201ENST00000623590 212 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 AC068254.2-201ENST00000623938 3577 ntBASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHGA9Q9Y5G4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA9Q9Y5G4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA9Q9Y5G4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA9Q9Y5G4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA9Q9Y5G4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA9Q9Y5G4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms