Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC083837.1-201ENST00000565297 2994 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 TMSB10P2-201ENST00000416049 131 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 RPL30P3-201ENST00000424262 333 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 PPIAP20-201ENST00000449839 135 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 RPS27AP3-201ENST00000453803 454 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 U8.22-201ENST00000459141 133 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 RN7SL326P-201ENST00000477493 296 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 OR7H2P-201ENST00000513483 306 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 RNA5SP206-201ENST00000516703 121 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 IGKV2-19-201ENST00000518132 283 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 MIR4701-201ENST00000583094 63 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AC009314.1-201ENST00000603871 304 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 AC100821.1-201ENST00000523153 2479 ntBASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.04□□□□□ -1.44
PCDHB3Q9Y5E6 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC027575.3-201ENST00000583058 2747 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC016745.2-201ENST00000608834 3443 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 Y_RNA.261-201ENST00000364631 102 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 RN7SKP78-201ENST00000364711 318 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 HMGN1P20-201ENST00000411849 300 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 REREP1Y-201ENST00000422655 198 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 REREP2Y-201ENST00000439103 200 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC079354.2-201ENST00000453523 154 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 U8.21-201ENST00000459536 136 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 RPL23AP2-201ENST00000471227 466 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC098847.1-201ENST00000473094 348 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AL035690.1-201ENST00000490892 383 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 LSM3P4-201ENST00000502948 309 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC006499.3-201ENST00000506077 748 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC006427.1-201ENST00000514359 712 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 RNU6-914P-201ENST00000516749 109 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC103783.1-201ENST00000520506 373 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 GSTP1P1-201ENST00000548078 319 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC114947.2-201ENST00000565748 2125 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 MIR3189-201ENST00000578735 73 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC008507.3-201ENST00000585753 472 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC005332.4-201ENST00000592752 579 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC074140.1-201ENST00000621617 208 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 MIR4302-201ENST00000638058 60 ntBASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDHB3Q9Y5E6 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
PCDHB3Q9Y5E6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 AC083843.3-201ENST00000623679 2186 ntBASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.286-201ENST00000364813 102 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms