Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 OR10V3P-201ENST00000525712 725 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC126177.3-201ENST00000551839 688 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 MTCYBP23-201ENST00000558717 1102 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 MIR4509-3-201ENST00000578671 94 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 MIR4509-2-201ENST00000583920 94 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 BNIP3P24-201ENST00000593398 557 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 MIR4509-1-201ENST00000618224 94 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC092650.2-201ENST00000619984 902 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC110801.1-201ENST00000623590 212 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 MIR422A-201ENST00000362286 90 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 RNA5SP107-201ENST00000411358 122 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC007899.1-201ENST00000412776 775 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC092447.6-201ENST00000414578 210 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 MTCO3P12-201ENST00000416718 547 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 RPL7P46-201ENST00000425129 740 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC092427.1-201ENST00000439177 601 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 OR10R1P-201ENST00000441524 1141 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 RPL39P6-201ENST00000448289 150 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 USP9YP34-201ENST00000453983 808 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 RN7SL863P-201ENST00000462370 296 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 RPS27P29-201ENST00000463110 252 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC080014.1-201ENST00000496877 1201 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC008507.1-201ENST00000587506 734 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 RPL23AP92-201ENST00000603609 255 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AL160237.3-201ENST00000604114 1013 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC021749.1-201ENST00000604322 607 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AL110115.1-201ENST00000614396 364 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC006386.2-201ENST00000624491 75 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 AC012005.1-201ENST00000624575 75 ntBASIC3.36□□□□□ -1.87
HPS4Q9NQG7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.36□□□□□ -1.87
HPS4Q9NQG7 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 RNU2-15P-201ENST00000410692 191 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 RPL21P32-201ENST00000419877 477 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 PSMA6P3-201ENST00000428242 164 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 RPL23AP69-201ENST00000431134 458 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 SNRPEP4-201ENST00000435815 279 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AL031313.1-201ENST00000448435 256 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 HMGB1P15-201ENST00000453854 435 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 snoU109.4-201ENST00000458953 143 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC021146.5-201ENST00000503544 545 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC105914.1-201ENST00000511798 226 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC104986.1-201ENST00000517978 436 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC005832.3-201ENST00000537929 631 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 HIGD1AP17-201ENST00000554576 276 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC015917.1-201ENST00000579654 510 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 LARP7P3-201ENST00000579888 337 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC245036.5-201ENST00000596330 847 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC012669.1-201ENST00000603209 283 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC055876.5-201ENST00000605667 259 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AC022509.4-201ENST00000621404 572 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AL590240.3-201ENST00000621416 943 ntBASIC3.35□□□□□ -1.87
HPS4Q9NQG7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HPS4Q9NQG7 AL049780.3-201ENST00000624612 1583 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AL136310.1-201ENST00000404926 654 ntBASIC3.34□□□□□ -1.87
HPS4Q9NQG7 AC126124.2-201ENST00000413542 321 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms