Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CYCSP43-201ENST00000438233 310 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC092473.1-201ENST00000441098 221 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 RNU7-136P-201ENST00000458819 69 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC087385.1-201ENST00000475062 312 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 RN7SL293P-201ENST00000481765 281 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC068724.1-201ENST00000487100 792 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC010424.1-201ENST00000506336 297 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 SNORA67.7-201ENST00000516664 135 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 OR4A45P-201ENST00000529954 901 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AP001004.1-201ENST00000582468 324 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 MIR3158-1-201ENST00000583596 81 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 MAGOH2P-202ENST00000584384 429 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC073544.2-201ENST00000601155 540 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AL162713.1-201ENST00000604480 262 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 RN7SKP299-201ENST00000606679 301 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC107214.2-201ENST00000608204 634 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC122108.2-201ENST00000611946 526 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC025588.4-201ENST00000615802 908 ntBASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SIX2Q9NPC8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC245291.1-201ENST00000419501 328 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 CYCSP46-201ENST00000423569 204 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL159987.2-201ENST00000432754 307 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL512286.1-201ENST00000439244 400 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 COX6CP2-201ENST00000444980 225 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AP000936.2-201ENST00000447151 681 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 ARPC3P5-201ENST00000448802 534 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 EPS15P1-201ENST00000448836 336 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL672167.3-201ENST00000465951 960 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC116337.2-201ENST00000477662 156 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 MTND4P2-201ENST00000507767 1203 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC091965.2-201ENST00000512324 613 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 HSPA8P13-201ENST00000523715 472 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 OR6C7P-201ENST00000547875 934 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 PCMTD1P2-201ENST00000565017 355 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 ZNF415P1-201ENST00000582279 1166 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 RSL24D1P11-201ENST00000591045 491 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC012360.2-201ENST00000609349 391 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 HULC.1-201ENST00000612720 240 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AC100793.4-201ENST00000613683 429 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 MTND4P16-201ENST00000466108 1367 ntBASIC3.49□□□□□ -1.85
SIX2Q9NPC8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX2Q9NPC8 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PABPC1P9-201ENST00000426076 1612 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RNA5SP50-201ENST00000363731 107 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 Y_RNA.194-201ENST00000363985 102 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RNU6-501P-201ENST00000364072 100 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RNU6-777P-201ENST00000364265 104 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RNU6-805P-201ENST00000365643 106 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 Y_RNA.553-201ENST00000384670 102 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 BTBD10P2-201ENST00000404779 676 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RNA5SP44-201ENST00000410446 133 ntBASIC3.48□□□□□ -1.85
SIX2Q9NPC8 RPL31P2-201ENST00000413849 377 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms