Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SNORA70E-201ENST00000384492 135 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AL356421.1-201ENST00000403255 413 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AL451054.2-201ENST00000420896 202 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC018630.2-202ENST00000422992 927 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 GTF2IP13-201ENST00000438487 386 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 HSPE1P28-201ENST00000443139 211 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AP1S2P1-201ENST00000457344 379 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC007547.1-201ENST00000462177 490 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AL163973.1-201ENST00000484753 577 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC090096.1-201ENST00000489168 390 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC106872.2-201ENST00000494303 480 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 RNU6-559P-201ENST00000516151 98 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 FKBP1BP1-201ENST00000553366 325 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 MIR5096-201ENST00000583713 70 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC016925.2-201ENST00000605108 242 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC080078.3-201ENST00000605407 463 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC084781.2-201ENST00000615568 161 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AC040168.1-201ENST00000623594 991 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 MTND5P16-201ENST00000460269 1703 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 ZNF734P-201ENST00000419494 1534 ntBASIC4.91□□□□□ -1.62
RNF38Q9H0F5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF38Q9H0F5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF38Q9H0F5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF38Q9H0F5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
RNF38Q9H0F5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF38Q9H0F5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.9□□□□□ -1.62
RNF38Q9H0F5 AC073343.1-201ENST00000328239 651 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.145-201ENST00000363527 102 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.231-201ENST00000364358 102 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 SNORA33.2-201ENST00000365413 134 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 RNU6-574P-201ENST00000384265 107 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 RNU6-831P-201ENST00000384548 107 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 RNA5SP397-201ENST00000391323 118 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AL590762.2-201ENST00000395798 571 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 RNU2-62P-201ENST00000410868 191 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC245054.2-201ENST00000415639 319 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC127526.1-201ENST00000417526 366 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 MTCO2P27-201ENST00000420740 428 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC012065.2-201ENST00000421295 375 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC092832.1-201ENST00000422934 400 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC127537.2-201ENST00000439258 465 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC079781.2-201ENST00000446424 169 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 ARL2BPP10-201ENST00000446487 531 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 MTND3P16-201ENST00000452205 344 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC093267.1-201ENST00000489176 961 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC108043.1-201ENST00000512696 574 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 HIGD1AP3-201ENST00000515857 278 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 SUMO2P20-201ENST00000520803 283 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AP003072.2-201ENST00000527756 676 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 DNAJC8P1-201ENST00000554535 372 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 MIR4715-201ENST00000584117 79 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 RN7SL435P-201ENST00000584418 282 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC079597.1-201ENST00000624306 508 ntBASIC4.9□□□□□ -1.63
RNF38Q9H0F5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF38Q9H0F5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
RNF38Q9H0F5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms