Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 TTI2-201ENST00000360742 2242 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 ERG-205ENST00000398910 4954 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC104825.2-201ENST00000505448 3249 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RCAN1-202ENST00000381132 2408 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 PWAR6-201ENST00000552334 4618 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC245060.6-201ENST00000624350 8420 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC092681.1-201ENST00000297369 291 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP378-201ENST00000363646 120 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-105P-201ENST00000363909 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.203-201ENST00000364106 102 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNVU1-7-201ENST00000383858 164 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU1-73P-201ENST00000383971 164 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA18.3-201ENST00000384122 132 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA48.1-201ENST00000390879 135 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP299-201ENST00000391203 116 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC084880.1-201ENST00000392530 545 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL11P3-201ENST00000395256 523 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR1306-201ENST00000408439 85 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-721P-201ENST00000410155 105 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-447P-201ENST00000410293 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-355P-201ENST00000410427 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP44-201ENST00000410446 133 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-791P-201ENST00000410467 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP200-201ENST00000410564 320 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-860P-201ENST00000410860 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-785P-201ENST00000411324 104 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC064862.3-201ENST00000411435 571 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 Z98751.1-201ENST00000413827 381 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 H2AFZP1-201ENST00000416034 395 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC234781.4-201ENST00000419384 244 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AL117378.1-202ENST00000421310 601 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 IQCF4-204ENST00000433169 414 ntTSL 3 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 HMGN2P24-201ENST00000433516 273 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC000362.1-201ENST00000433725 425 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL19P16-201ENST00000433839 588 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC099677.2-201ENST00000436385 175 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC110602.1-201ENST00000437414 318 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC069257.2-201ENST00000441819 155 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AC007969.2-201ENST00000441891 191 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SFTPA3P-201ENST00000446429 367 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL37P4-201ENST00000448908 268 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 SPATA24-203ENST00000451821 646 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RPS29P12-201ENST00000460178 152 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL326P-201ENST00000477493 296 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL630P-201ENST00000483714 297 ntBASIC1.56□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL653P-201ENST00000494134 293 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms