Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RANP9-201ENST00000519957 271 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 DEFB108D-201ENST00000527787 222 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC135001.1-201ENST00000544546 283 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL161670.1-201ENST00000554348 137 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC024619.4-201ENST00000580924 316 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL670379.6-201ENST00000603753 252 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC008162.1-201ENST00000604718 254 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL670379.1-201ENST00000604752 252 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL670379.5-201ENST00000605253 252 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL670379.8-201ENST00000605353 252 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL670379.7-201ENST00000605823 252 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC103705.1-201ENST00000619013 241 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 MIR6130-201ENST00000619419 109 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 MIR6719-201ENST00000622428 87 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL445363.3-201ENST00000623080 671 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL136313.1-201ENST00000624804 202 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC000374.1-201ENST00000434698 1745 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 API5P2-201ENST00000397055 1498 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 GABPAP-201ENST00000419271 1356 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 THAP12P5-201ENST00000405864 2275 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 RN7SKP162-201ENST00000363605 345 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 SNORD116-11-201ENST00000383882 92 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 SNORA24.1-201ENST00000384401 135 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-310P-201ENST00000384655 107 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 MIR589-201ENST00000385238 99 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 RNA5SP56-201ENST00000410277 118 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AL590609.2-201ENST00000421430 368 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC018865.2-201ENST00000423631 129 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC104058.1-201ENST00000448028 297 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 HMGB3P21-201ENST00000452483 547 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 HMGB1P25-201ENST00000468402 607 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 RPL7P23-201ENST00000493874 747 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 HIGD1AP13-201ENST00000509878 289 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC098976.1-201ENST00000513014 541 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 RNA5SP373-201ENST00000517271 95 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 PTP4A1P6-201ENST00000531034 478 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC022884.2-201ENST00000578535 580 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC109583.2-201ENST00000617367 129 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AC010378.1-201ENST00000619270 362 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 AL669831.3-213ENST00000636676 183 ntBASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM56Q9BRZ2 ZNF807-201ENST00000328088 1707 ntBASIC5.34□□□□□ -1.56
TRIM56Q9BRZ2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM56Q9BRZ2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM56Q9BRZ2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
TRIM56Q9BRZ2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AC090337.1-201ENST00000579651 2074 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AC093591.2-201ENST00000565254 3843 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 Y_RNA.5-201ENST00000362334 102 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 RNA5SP335-201ENST00000363817 110 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 RN7SKP124-201ENST00000364730 341 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 RNU1-77P-201ENST00000390868 162 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AL391417.1-201ENST00000404100 426 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AC114482.1-201ENST00000418010 247 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 PDSS1P1-201ENST00000422953 1114 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 RAC1P6-201ENST00000423911 575 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 CBX3P6-201ENST00000430257 527 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AC234775.1-201ENST00000454247 670 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 RPL21P8-201ENST00000465083 535 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 COPS8P2-201ENST00000473228 627 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 RN7SL432P-201ENST00000484057 298 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 AC015911.1-201ENST00000495111 156 ntBASIC5.33□□□□□ -1.56
TRIM56Q9BRZ2 MRPS35P2-201ENST00000508242 191 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms