Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AP002404.1-201ENST00000532005 451 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC015720.2-201ENST00000567709 334 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC104695.2-201ENST00000605056 775 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 AC022400.9-201ENST00000623633 273 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CITED4Q96RK1 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 FANCD2P2-201ENST00000437591 1400 ntBASIC5.05□□□□□ -1.6
CITED4Q96RK1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CITED4Q96RK1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CITED4Q96RK1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 EOGT-210ENST00000615922 1931 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 Y_RNA.48-201ENST00000362710 103 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 Y_RNA.80-201ENST00000362996 102 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 RNU6-238P-201ENST00000363313 106 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 Y_RNA.176-201ENST00000363815 109 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 RN7SKP15-201ENST00000364742 309 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 Y_RNA.314-201ENST00000365114 102 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 Y_RNA.455-201ENST00000384230 98 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 Y_RNA.485-201ENST00000384395 102 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 RNA5SP122-201ENST00000384457 108 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 RPL12P23-201ENST00000405880 490 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 U3.35-201ENST00000408405 208 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 OR2AT2P-201ENST00000413438 905 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC243428.1-201ENST00000421099 264 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 ACA59.1-201ENST00000515966 143 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 RNA5SP290-201ENST00000517133 127 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 HSBP1P1-201ENST00000555205 166 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 MIR3921-201ENST00000577308 85 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC026898.1-201ENST00000586404 571 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 AL590032.1-201ENST00000604920 252 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 uc_338.29-201ENST00000615099 168 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 AC061999.1-201ENST00000624454 177 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 Z69720.2-201ENST00000624755 279 ntBASIC5.04□□□□□ -1.6
CITED4Q96RK1 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CITED4Q96RK1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CITED4Q96RK1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CITED4Q96RK1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CITED4Q96RK1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 MAPK10-349ENST00000641767 3661 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CITED4Q96RK1 RNA5SP308-201ENST00000362532 115 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 SNORD35A-201ENST00000363389 86 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 RNA5SP455-201ENST00000365190 119 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 SNORA41-201ENST00000384675 132 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 MIR1275-201ENST00000408770 80 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 HMGB3P2-201ENST00000411913 584 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 BX276092.3-201ENST00000424182 230 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 TOMM20P4-201ENST00000427861 435 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AC006946.1-201ENST00000429106 328 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CITED4Q96RK1 RPS27P18-201ENST00000431701 247 ntBASIC5.03□□□□□ -1.6
CITED4Q96RK1 AL353997.1-201ENST00000432936 108 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms