Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC027104.1-201ENST00000563702 681 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC135803.1-201ENST00000608748 565 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 ADAM3A-203ENST00000461344 2157 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 RNU1-17P-201ENST00000363022 152 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC109583.1-201ENST00000432156 268 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 USP9YP8-201ENST00000441913 500 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MTND3P6-201ENST00000485242 339 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 RNU4-60P-201ENST00000517239 135 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MIR3670-2-201ENST00000582974 65 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MIR3670-1-201ENST00000584160 65 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MIR3670-3-201ENST00000584855 65 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC055764.2-201ENST00000610089 670 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MIR3670-4-201ENST00000612260 65 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC121761.2-201ENST00000617300 689 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AC092650.2-201ENST00000619984 902 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 LINC00216-201ENST00000623548 1126 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 MIR4496-201ENST00000635896 61 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH15Q96QU1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 AL359893.1-201ENST00000447628 1580 ntBASIC2.1□□□□□ -2.07
PCDH15Q96QU1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 MIR142-201ENST00000384835 87 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AL354719.1-201ENST00000406535 843 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 DPPA2P1-201ENST00000428060 556 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AL118520.1-201ENST00000450770 291 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 MTCO3P42-201ENST00000509488 518 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 MTCO3P39-201ENST00000514812 518 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 RNA5SP402-201ENST00000517148 110 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AC008083.2-201ENST00000546707 476 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 AC078814.3-201ENST00000553036 491 ntBASIC2.09□□□□□ -2.07
PCDH15Q96QU1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
PCDH15Q96QU1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 Y_RNA.164-201ENST00000363709 102 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 RNA5SP344-201ENST00000411081 104 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 RPL34P26-201ENST00000445636 354 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 AC098799.2-201ENST00000509466 868 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 SNORA31.26-201ENST00000517250 137 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 OR6C73P-201ENST00000546432 358 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 AC010198.2-201ENST00000550612 259 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 AC103988.1-201ENST00000566382 2177 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 AL356575.1-201ENST00000603008 283 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 AC009032.1-201ENST00000617574 431 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.09□□□□□ -2.08
PCDH15Q96QU1 CU459211.1-201ENST00000635667 749 ntBASIC2.09□□□□□ -2.08
PCDH15Q96QU1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 SNORA48.3-201ENST00000391081 134 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 SPA17P1-201ENST00000416656 452 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC005912.1-201ENST00000495392 255 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC078918.1-201ENST00000498515 228 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 GNAI2P1-201ENST00000541815 315 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AP003117.1-201ENST00000602771 554 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC090525.3-201ENST00000605601 189 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 AC242628.1-201ENST00000606810 391 ntBASIC2.08□□□□□ -2.08
PCDH15Q96QU1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms