Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC007283.2-201ENST00000424739 197 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AL035410.1-201ENST00000427409 427 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC017083.1-201ENST00000428093 483 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 RPL22P17-201ENST00000438729 315 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 MTATP6P30-201ENST00000443540 664 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 TPT1P14-201ENST00000448018 505 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AL162151.2-201ENST00000448875 158 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC104073.1-201ENST00000451988 151 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 HMGN3P1-201ENST00000453847 193 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 HMGB3P30-201ENST00000457863 606 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 snoU13.7-201ENST00000459220 104 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RPL31P58-201ENST00000469001 379 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 RBM43P1-201ENST00000476891 1081 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RPS29P19-201ENST00000479709 171 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 FAM172BP-201ENST00000487497 1089 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC090453.1-201ENST00000495560 436 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC008628.2-201ENST00000502605 298 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC025445.1-201ENST00000502728 300 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 KLRA1P-201ENST00000503499 986 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 FTH1P24-201ENST00000503502 462 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC022447.3-201ENST00000506865 495 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC114781.4-201ENST00000513707 639 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 RNA5SP216-201ENST00000516111 123 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AP003467.2-201ENST00000520175 319 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 COX6CP8-201ENST00000522620 226 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 MIR1254-2-201ENST00000579553 63 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RN7SL600P-201ENST00000581811 299 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC005730.3-201ENST00000583067 366 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 TPMTP1-201ENST00000592307 737 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC244505.7-201ENST00000599675 272 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 RPL7P50-201ENST00000600588 727 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 CKS1BP3-201ENST00000600888 237 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC008638.3-201ENST00000603341 463 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AP003117.2-201ENST00000606010 545 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC103710.3-201ENST00000608157 948 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC103710.1-201ENST00000610003 901 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 MIR8059-201ENST00000620427 81 ntBASIC3.28□□□□□ -1.88
DUX3Q96PT4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
DUX3Q96PT4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.28□□□□□ -1.89
DUX3Q96PT4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
DUX3Q96PT4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DUX3Q96PT4 CASC19-280ENST00000642102 1351 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DUX3Q96PT4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DUX3Q96PT4 AL049780.3-201ENST00000624612 1583 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 GNG5P1-201ENST00000255500 204 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DUX3Q96PT4 RNU6-853P-201ENST00000364306 107 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 SNORA57.1-201ENST00000391227 145 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 RNU6-876P-201ENST00000391295 104 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 RPL31P1-201ENST00000398116 372 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 HMGB1P17-201ENST00000403495 628 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 MIR1305-201ENST00000408300 86 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 MTCO1P17-201ENST00000411522 491 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.27□□□□□ -1.89
DUX3Q96PT4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.27□□□□□ -1.89
DUX3Q96PT4 AC138393.2-201ENST00000414742 246 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
DUX3Q96PT4 COX6CP15-201ENST00000426313 211 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.27□□□□□ -1.89
DUX3Q96PT4 MTCO2P11-201ENST00000431069 680 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 SNRPEP7-201ENST00000438350 220 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 AL138799.3-201ENST00000438968 350 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.27□□□□□ -1.89
DUX3Q96PT4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.27□□□□□ -1.89
DUX3Q96PT4 C1DP4-201ENST00000455429 424 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.27□□□□□ -1.89
DUX3Q96PT4 NIPA2P2-201ENST00000496376 1083 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 AC112204.1-201ENST00000502591 103 ntBASIC3.27□□□□□ -1.89
DUX3Q96PT4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms