Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AP004289.2-201ENST00000444413 1457 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 BDP1P-201ENST00000582658 1990 ntBASIC3.6□□□□□ -1.83
BEST3Q8N1M1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.6□□□□□ -1.83
BEST3Q8N1M1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 FRG1BP-201ENST00000278882 761 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 MIR3074-201ENST00000384885 81 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 MIR200C-201ENST00000384980 68 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 SNORD115.1-201ENST00000391109 76 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 SNORA3.3-201ENST00000408712 125 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AL359704.1-201ENST00000411586 781 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 CYP4F29P-201ENST00000420685 446 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC112653.1-201ENST00000443851 386 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 VN1R34P-201ENST00000447387 883 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 PDSS1P2-201ENST00000449397 678 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC098824.1-201ENST00000453565 980 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 Z82190.1-201ENST00000454534 490 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 SNORD121B-201ENST00000458838 81 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 ARL2BPP4-201ENST00000506854 471 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC079140.3-201ENST00000511111 550 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AP002748.2-201ENST00000528671 348 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 CR383656.7-201ENST00000548164 174 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC011451.2-201ENST00000604303 598 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AL031176.1-201ENST00000604554 466 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC012557.2-201ENST00000605919 418 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC104010.1-201ENST00000616889 150 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AL591424.2-201ENST00000617023 128 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC009509.4-201ENST00000619202 509 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC002550.2-201ENST00000621246 394 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC079597.1-201ENST00000624306 508 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AC012442.3-202ENST00000636742 206 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AL773545.4-201ENST00000637262 310 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 AL513478.4-201ENST00000641636 310 ntBASIC3.59□□□□□ -1.83
BEST3Q8N1M1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.59□□□□□ -1.83
BEST3Q8N1M1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
BEST3Q8N1M1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC092125.1-201ENST00000562568 1995 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 Y_RNA.559-201ENST00000384686 107 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 U3.20-201ENST00000390909 217 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 RNA5SP171-201ENST00000391071 115 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AL138878.1-201ENST00000405131 347 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 RNU6-712P-201ENST00000410558 100 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 RNU2-47P-201ENST00000410649 186 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 HMGN1P14-201ENST00000412459 517 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 CDK8P2-201ENST00000415020 547 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC244098.2-201ENST00000422068 99 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC087650.1-201ENST00000431445 468 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 RPL22P17-201ENST00000438729 315 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 MTND1P9-201ENST00000453775 944 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC104308.1-201ENST00000454621 333 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 CFTRP1-201ENST00000456646 183 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC010342.1-201ENST00000514047 877 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 PAICSP4-201ENST00000517543 1253 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AP003497.1-201ENST00000528472 562 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.58□□□□□ -1.84
BEST3Q8N1M1 BNIP3P8-201ENST00000597863 560 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC112191.3-201ENST00000604371 277 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AL359999.1-201ENST00000604513 294 ntBASIC3.58□□□□□ -1.84
BEST3Q8N1M1 AC138749.5-201ENST00000611461 208 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms