Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AC006270.2-201ENST00000578523 652 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 TPMTP1-201ENST00000592307 737 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AC010620.1-201ENST00000601088 1102 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 XIAPP1-201ENST00000603162 600 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AC103858.2-201ENST00000621471 543 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AL359715.5-201ENST00000623431 443 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AC091965.5-201ENST00000624785 342 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 MARK2P15-201ENST00000432204 2186 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 AP001350.1-201ENST00000601906 1524 ntBASIC4.14□□□□□ -1.75
HERC6Q8IVU3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HERC6Q8IVU3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 ZNF833P-201ENST00000424938 1494 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC006378.2-201ENST00000623178 2476 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 MIR490-201ENST00000384865 128 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 MT-TH-201ENST00000387441 69 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 HSFY4P-201ENST00000415994 1181 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 ISCA1P2-201ENST00000438679 421 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 HMGB3P22-202ENST00000451823 572 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 KATNBL1P6-201ENST00000453433 915 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC098824.1-201ENST00000453565 980 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 UBDP1-202ENST00000457888 382 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 OR2A20P-203ENST00000498397 1268 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC105313.1-201ENST00000509121 353 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 SNORA31.20-201ENST00000517111 133 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC107016.1-201ENST00000550463 337 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC012669.1-201ENST00000603209 283 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 RNU1-30P-201ENST00000606575 163 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 AC002550.2-201ENST00000621246 394 ntBASIC4.13□□□□□ -1.75
HERC6Q8IVU3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HERC6Q8IVU3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 FRG1BP-201ENST00000278882 761 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 SNORA31-201ENST00000362607 130 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 MIR607-201ENST00000385241 96 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 MIR199A2-201ENST00000385289 110 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 U8.14-201ENST00000390843 143 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 RPL7P60-201ENST00000397636 735 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 MIR1302-8-201ENST00000408342 128 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 SNORA3C-201ENST00000408792 125 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 NPM1P49-201ENST00000448027 714 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC073387.1-201ENST00000453261 709 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AP1S2P1-201ENST00000457344 379 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 SNORD121B-201ENST00000458838 81 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC010285.1-201ENST00000470580 392 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 RN7SL601P-201ENST00000471221 293 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 SETP11-201ENST00000473027 690 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 HMGB1P36-201ENST00000487709 576 ntBASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.12□□□□□ -1.75
HERC6Q8IVU3 AC007458.1-201ENST00000542812 373 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms