Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS4Q8IUM7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 SAMMSON-226ENST00000642089 1582 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 RNA5SP505-201ENST00000364748 108 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 Y_RNA.315-201ENST00000365117 102 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 SNORA33.2-201ENST00000365413 134 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 SNORD42.2-201ENST00000365570 69 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 SMIM11P1-201ENST00000369586 178 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 RNU6-1013P-201ENST00000384180 107 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC097374.1-203ENST00000400783 485 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 NDUFB4P5-201ENST00000415445 361 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AF186996.5-201ENST00000418098 904 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC244098.2-201ENST00000422068 99 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 RPL7L1P10-201ENST00000427790 463 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC093106.2-201ENST00000428212 385 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 HMGB1P27-201ENST00000431429 603 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 BX323845.1-201ENST00000432417 179 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC012158.1-204ENST00000483430 465 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC093815.1-201ENST00000508637 280 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 MIR4742-201ENST00000581069 85 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 MIR4697-201ENST00000582977 78 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 BDH2P1-201ENST00000602288 736 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC104763.2-201ENST00000604179 382 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC012409.4-201ENST00000612923 249 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AL359547.2-201ENST00000615810 418 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AC015967.1-201ENST00000619893 476 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AL357559.1-201ENST00000622228 274 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 AP001273.1-201ENST00000624493 3152 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 ABCC13-202ENST00000463099 3842 ntBASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPAS4Q8IUM7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
NPAS4Q8IUM7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.202-201ENST00000364083 110 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 RNU6-335P-201ENST00000364563 113 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 RNA5SP235-201ENST00000365411 114 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.373-201ENST00000365600 103 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.387-201ENST00000383918 102 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 RNU6-1181P-201ENST00000384191 106 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.615-201ENST00000410769 117 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 RPL30P2-201ENST00000414021 291 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AL645937.1-202ENST00000421799 937 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 GAPDHP27-201ENST00000447427 1020 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.654-201ENST00000497848 106 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 KLHL2P1-201ENST00000508691 521 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 RNU6-1170P-201ENST00000515974 106 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 RNU4-49P-201ENST00000516080 140 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 RPL7P20-201ENST00000520308 745 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 DNAJC8P1-201ENST00000554535 372 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AC019322.1-201ENST00000571869 389 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 MIR4424-201ENST00000585257 86 ntBASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.46□□□□□ -1.54
NPAS4Q8IUM7 AC068790.4-201ENST00000602474 263 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms