Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 ZNF663P-202ENST00000641770 1131 ntBASIC3.86□□□□□ -1.79
NPHP3Q7Z494 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.86□□□□□ -1.79
NPHP3Q7Z494 MTND5P24-201ENST00000438892 1767 ntBASIC3.86□□□□□ -1.79
NPHP3Q7Z494 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPHP3Q7Z494 AL359893.1-201ENST00000447628 1580 ntBASIC3.86□□□□□ -1.79
NPHP3Q7Z494 MTND5P31-201ENST00000419366 1374 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC000367.1-201ENST00000452711 1766 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 RNU6-619P-201ENST00000365146 108 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 MTCO3P31-201ENST00000405526 789 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC233981.1-201ENST00000423224 461 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 TOMM20P4-201ENST00000427861 435 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 NPM1P49-201ENST00000448027 714 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AP002884.2-201ENST00000471647 395 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 ANXA2P1-201ENST00000505539 926 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AP004242.1-201ENST00000533701 349 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AL132857.1-201ENST00000555180 708 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 MIR5708-201ENST00000579723 85 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC090616.5-202ENST00000582111 297 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AL355816.2-201ENST00000610049 647 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC010975.3-201ENST00000618727 978 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AC021755.1-201ENST00000559747 1447 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 AL157700.1-201ENST00000561973 1432 ntBASIC3.85□□□□□ -1.79
NPHP3Q7Z494 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP3Q7Z494 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 RPL7P26-201ENST00000333817 754 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 AL079342.2-201ENST00000403367 482 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 SNORA3.2-201ENST00000408221 125 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 RNA5SP274-201ENST00000410484 108 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 RNU4-22P-201ENST00000411058 166 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 HMGB3P23-201ENST00000414981 585 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 AC009237.2-201ENST00000421358 284 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 AC003685.2-201ENST00000422795 395 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 COX6CP18-201ENST00000448769 222 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 AC021146.5-201ENST00000503544 545 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 RNA5SP148-201ENST00000516527 94 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
NPHP3Q7Z494 MIR3186-201ENST00000577404 85 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 KC877982.1-201ENST00000602313 470 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 AC106052.1-201ENST00000608029 497 ntBASIC3.84□□□□□ -1.79
NPHP3Q7Z494 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NPHP3Q7Z494 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NPHP3Q7Z494 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NPHP3Q7Z494 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AL355578.1-201ENST00000607405 1328 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 RNU4-51P-201ENST00000364206 140 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 RNU6-921P-201ENST00000384361 107 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 EIF5P1-201ENST00000400019 1231 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 U3.42-201ENST00000408746 214 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC244098.2-201ENST00000422068 99 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 MTCO2P17-201ENST00000424336 677 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC092648.1-201ENST00000425870 423 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 NANOGP2-201ENST00000435391 727 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 snoU13.15-201ENST00000459407 104 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 RPL9P32-201ENST00000464118 620 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC092451.1-201ENST00000480211 153 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC134050.1-201ENST00000495088 933 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 RPL21P131-201ENST00000497298 483 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC084024.2-201ENST00000503480 791 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC005921.1-201ENST00000510589 286 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 RNA5SP217-201ENST00000515959 91 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC068657.1-201ENST00000520807 306 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AC107954.1-201ENST00000565906 727 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 AGGF1P5-201ENST00000567900 919 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 MTND3P13-201ENST00000574391 343 ntBASIC3.83□□□□□ -1.8
NPHP3Q7Z494 MIR4666A-201ENST00000580160 79 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms