Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SNORA25.14-201ENST00000516481 132 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.683-201ENST00000516508 93 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.687-201ENST00000516558 91 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 IGLV3-24-201ENST00000517477 197 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 DEFB108E-201ENST00000524692 240 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 IRF5P1-201ENST00000504852 2164 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 AL034546.1-201ENST00000623740 3693 ntBASIC5.67□□□□□ -1.5
LYSMD3Q7Z3D4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RNA5SP46-201ENST00000362370 120 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 Y_RNA.83-201ENST00000363005 113 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RNA5SP326-201ENST00000363209 110 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RNA5SP391-201ENST00000363456 119 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RNU1-130P-201ENST00000363930 160 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC096921.1-201ENST00000411661 375 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 Z95327.1-201ENST00000446082 482 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-1218P-201ENST00000458990 108 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RNU7-120P-201ENST00000459334 63 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RN7SL177P-201ENST00000476596 299 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC107393.1-201ENST00000512403 346 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 CBX3P4-201ENST00000538909 354 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC137627.1-201ENST00000545761 289 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC090022.1-201ENST00000546569 311 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AC004832.4-201ENST00000608952 331 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RNA5SP440-201ENST00000612665 119 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 SNHG22-203ENST00000617833 660 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 AL161637.1-201ENST00000622380 412 ntBASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.66□□□□□ -1.5
LYSMD3Q7Z3D4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 HSPA8P1-201ENST00000425843 1833 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AL137003.2-201ENST00000606924 2538 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 RNA5SP131-201ENST00000365452 119 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-701P-201ENST00000384059 107 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 RNU6-754P-201ENST00000391166 107 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC113412.1-201ENST00000425840 504 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC004453.1-201ENST00000487895 408 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 RN7SKP82-201ENST00000516786 223 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 IGKV2-23-201ENST00000518729 323 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC092470.1-201ENST00000546187 132 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC022404.1-201ENST00000555320 273 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 SNORD95-201ENST00000579879 68 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 MIR4273-201ENST00000582824 84 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC012119.1-201ENST00000603184 222 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 MIR6826-201ENST00000617808 98 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 AC073869.10-201ENST00000642016 354 ntBASIC5.65□□□□□ -1.5
LYSMD3Q7Z3D4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LYSMD3Q7Z3D4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms