Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 OR5BN1P-201ENST00000532955 829 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AC006504.6-201ENST00000590142 199 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 MIR6864-201ENST00000617935 70 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RNA5SP196-201ENST00000625967 102 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 ZFRP1-201ENST00000457579 2970 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC073343.1-201ENST00000328239 651 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC067945.1-201ENST00000342609 618 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 RNU5A-8P-201ENST00000364102 114 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 RPS26P8-201ENST00000393490 348 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 Y_RNA.615-201ENST00000410769 117 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC011933.1-201ENST00000413334 321 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AL645937.1-202ENST00000421799 937 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 RPL34P6-201ENST00000432390 345 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC239809.1-201ENST00000450470 217 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 NANOGP10-201ENST00000453325 895 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 SNORD19B-201ENST00000459623 84 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC116533.1-201ENST00000459748 321 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC034236.1-201ENST00000469891 373 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC105417.1-201ENST00000514691 285 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 FKBP1BP1-201ENST00000553366 325 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC026464.5-201ENST00000562497 722 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC093591.2-201ENST00000565254 3843 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC093249.1-201ENST00000567049 203 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 MIR4472-2-201ENST00000582069 67 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 RN7SL435P-201ENST00000584418 282 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC091979.2-201ENST00000607514 214 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AL023881.1-201ENST00000621088 301 ntBASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.75□□□□□ -1.49
PRPF40BQ6NWY9 AC009902.3-201ENST00000606235 2172 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 Y_RNA.100-201ENST00000363141 102 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 Y_RNA.259-201ENST00000364619 101 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-193P-201ENST00000410977 107 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 TMSB10P2-201ENST00000416049 131 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 OR1AA1P-201ENST00000419597 916 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 RPL36AP10-201ENST00000421785 322 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC004938.1-201ENST00000438468 308 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 TDGF1P1-201ENST00000445734 527 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC108059.3-201ENST00000456388 214 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AL590639.1-201ENST00000456484 337 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 snoU13.7-201ENST00000459220 104 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 RN7SKP13-201ENST00000515933 244 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 SNORD27.1-201ENST00000516319 72 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 MIR4429-201ENST00000580105 73 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 IPO5P1-202ENST00000600039 287 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AC244100.1-202ENST00000621554 382 ntBASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.74□□□□□ -1.49
PRPF40BQ6NWY9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms