Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL13A1Q5TAT6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL13A1Q5TAT6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
COL13A1Q5TAT6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL13A1Q5TAT6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 AC004158.1-201ENST00000564508 4319 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 RNU6-1252P-201ENST00000363054 104 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 Y_RNA.252-201ENST00000364556 101 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 SNORD115-7-201ENST00000365306 82 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 SNORD116-11-201ENST00000383882 92 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 RNU6-310P-201ENST00000384655 107 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 Y_RNA.557-201ENST00000384680 107 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 UBE2V1P2-201ENST00000397758 440 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 BX323014.1-201ENST00000412876 237 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 AC009302.1-201ENST00000417147 390 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 RNF10P1-201ENST00000418589 369 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 AL445584.1-201ENST00000431451 330 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 RPL7P43-201ENST00000478876 753 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 AL132838.2-201ENST00000492041 314 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 GLUD1P3-202ENST00000508551 200 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 RPS27AP18-201ENST00000515536 459 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 MYL12BP1-201ENST00000569826 507 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 PLCE1P1-201ENST00000622094 305 ntBASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
COL13A1Q5TAT6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 Y_RNA.80-201ENST00000362996 102 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 SNORD1C-201ENST00000363315 78 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 RNU6-1243P-201ENST00000364028 107 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 SNORD82-201ENST00000365530 70 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 Y_RNA.556-201ENST00000384677 113 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 RNU6-328P-201ENST00000390887 106 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AL590609.2-201ENST00000421430 368 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 MIR2053-201ENST00000459295 91 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 RN7SL283P-201ENST00000489055 303 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC097473.1-201ENST00000508142 408 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 RN7SKP289-201ENST00000517244 295 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 SNORA51-201ENST00000606420 132 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 AC103705.1-201ENST00000619013 241 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 SALL4P2-201ENST00000423288 2910 ntBASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
COL13A1Q5TAT6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.61□□□□□ -1.51
COL13A1Q5TAT6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms